Pacificitalea manganoxidans: CBW24_03925
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Entry
CBW24_03925 CDS
T05128
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
cmag
Pacificitalea manganoxidans
Brite
KEGG Orthology (KO) [BR:
cmag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmag03032
]
CBW24_03925
03036 Chromosome and associated proteins [BR:
cmag03036
]
CBW24_03925
03400 DNA repair and recombination proteins [BR:
cmag03400
]
CBW24_03925
DNA replication proteins [BR:
cmag03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CBW24_03925
Chromosome and associated proteins [BR:
cmag03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CBW24_03925
DNA repair and recombination proteins [BR:
cmag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CBW24_03925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Tim44
Motif
Other DBs
NCBI-ProteinID:
ATI41233
UniProt:
A0A291LWW6
LinkDB
All DBs
Position
855229..855510
Genome browser
AA seq
93 aa
AA seq
DB search
MIRSELIQKIADENPHLYQRDVERIVNTIFEEIIEAMARGDRVELRGFGAFSVKKRDART
GRNPRTGEAVEVEEKHVPFFKTGKLLRDRLNDS
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggtccgaactgatccagaagatcgcagacgaaaatccgcatctctatcagcgc
gatgtcgagcgcatcgtgaacaccattttcgaagaaatcatcgaagccatggcgcggggc
gaccgtgtcgaactgcgtgggttcggggcgttttcggtcaagaaacgcgacgcccgcacc
ggccgcaacccccgcaccggcgaggcggtagaggtcgaggaaaagcatgtgcccttcttc
aagaccggcaagctgctgcgcgaccgtttgaacgattcctga
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integrated database retrieval system
