Pacificitalea manganoxidans: CBW24_11340
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Entry
CBW24_11340 CDS
T05128
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
cmag
Pacificitalea manganoxidans
Brite
KEGG Orthology (KO) [BR:
cmag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmag03021
]
CBW24_11340
Transcription machinery [BR:
cmag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CBW24_11340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
HTH_3
HTH_11
DUF4250
Motif
Other DBs
NCBI-ProteinID:
ATI42541
UniProt:
A0A291M0P6
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All DBs
Position
complement(2508194..2509093)
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AA seq
299 aa
AA seq
DB search
MANYGNLPAPSPEGGLNRYLQEIRRFPMLEPEQEYMLAKRWVDHQDTDAAHQMVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRS
WSLVKLGTTSAQKKLFFNLRKAKARIGALEEGDLRPENVKQIANDLNVTEDEVISMNRRM
SGGDASLNATVGSDGDTTTQWQDWLEDEDSDQAEAYAESDEMNVRLTLLTEAMDVLNDRE
KNILEQRRLRDEPMTLEELSGEYDVSRERIRQIEVRAFEKLQKRMTELAREKGMVPEPA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggccaattacggaaatcttcccgcaccgtcacccgagggcgggctgaaccgctatctg
caggaaatccgccgcttcccgatgctggaaccggagcaggaatacatgctggcaaagcgc
tgggtggatcatcaggacaccgacgcggcgcatcagatggttacgagccatctgcggctc
gccgcgaaaatcgcgatgggctatcgcggctatggcttgccgcaggctgaggtgatttca
gaggcgaatgtgggcctgatgcaggcggtgaagcgattcgaccctgagaaggggttccgc
cttgcgacctatgcgatgtggtggatccgcgcctcgatccaggaatatatcctgcggtcg
tggagccttgtgaaactgggcaccacctcggcgcagaagaagctgtttttcaacctgcgc
aaggccaaggcccggatcggcgcgctggaagagggcgatctgcgcccggaaaacgtcaaa
cagatcgccaacgacctgaacgtgaccgaggatgaggtcatttcgatgaaccggcggatg
tcggggggcgatgcgtcgctcaacgccactgtgggatcggatggcgacaccacgacgcaa
tggcaggactggctggaggacgaagacagcgatcaggccgaagcctatgccgaaagcgac
gagatgaacgtgcgtctgacgttgctgaccgaggcgatggacgtgctcaacgatcgtgag
aagaacatcctcgaacagcggcgcctgcgcgatgagccgatgacgctggaggagctttcg
ggtgaatacgacgtcagccgggagcgtatccgtcagatcgaggtgcgcgcgttcgagaag
ctgcaaaagcggatgaccgaactggcccgcgaaaaggggatggtgcccgagccggcgtaa
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