KEGG   Pacificitalea manganoxidans: CBW24_12115
Entry
CBW24_12115       CDS       T05128                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cmag  Pacificitalea manganoxidans
Pathway
cmag03420  Nucleotide excision repair
cmag03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CBW24_12115
   03430 Mismatch repair
    CBW24_12115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmag03400]
    CBW24_12115
Enzymes [BR:cmag01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CBW24_12115
DNA repair and recombination proteins [BR:cmag03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CBW24_12115
   MMR (mismatch excision repair)
    Other MMR factors
     CBW24_12115
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 AAA_30 UvrD_C_2 PcrA_UvrD_tudor AAA_11 CarD_TRCF_RID
Other DBs
NCBI-ProteinID: ATI42676
UniProt: A0A291M132
LinkDB
Position
complement(2672283..2674655)
AA seq 790 aa
MSSYDDNDAFEAAARVPLSQRAMGAQAHPYLNDLNPAQREAVEALDGPVLMLAGAGTGKT
KALTTRIAHLLRTGTARPHEILAVTFTNKAAREMKNRVARHLGETVEGMPWLGTFHAICV
KLLRRHAELVGLKPNFTILDTDDQIRLLKQLISAANIDEKRWPARQLAGIIDGWKNQART
PDRIPAAEASAFDGKGPALYAAYQERLRTLNAVDFGDLLLHMLVIFQTHEDVLAQYRRWF
RFIMVDEYQDTNVAQYLWLRLLASEHRNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGA
RVIRLEQNYRSTPHILAAASGVIAANQGRLGKTLWTEEQDGEKVRLIGHWDGEEEARWIG
EELESMQQGTRGLRPFNLDQCAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIR
DAMAYFRVAVSPDDDLAFERIVNTPKRGLGEKAIQKMQIAARANGVSLFEGARLVLAAGD
LAGRAKGQLTALLDGFGRWHGAVLDQRESHVELAETILEESGYVAHWQNDKTPEAPGRLE
NLKELVKALENFENLQGFLEHVALIMDNETEEGGPKVSIMTLHGAKGLEFPAVFLPGWED
GLFPSQRAMDEQGLKGLEEERRLAYVGITRAEELCTISFAANRRIYGQWQSALPSRFIDE
LPEQHVDVLTPPGLYGGGYGAAGMDSSFGSGIEQRAASANVYNSPGWKRLQARGAQRGMA
QPQESRNMVIDMTAVSAFTTGDRVFHQKFGYGVVADIEGDKLEVAFDKAGRKKIVAKFVV
SADAADDVPF
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgagcagctatgatgacaacgacgccttcgaggcggcggcccgtgtgccgttgtcgcaa
cgcgccatgggcgcgcaggcccacccgtatctgaatgatctcaaccccgcgcagcgcgaa
gcggtggaagcgctggacggtccggttctaatgttggccggggccggcaccggtaagacc
aaggcgttgacgacccggatcgcgcatctgctgcgcaccggcaccgcgcgcccgcacgaa
atccttgcggtaaccttcaccaacaaggccgcccgcgagatgaaaaaccgcgtcgcgcgg
catcttggcgagacggtcgaggggatgccgtggctgggcacgttccatgcgatctgtgtg
aaattgctgcgccgccacgcggaactggtcgggttgaagccgaacttcaccattctcgac
acggacgatcagatccgcctgctcaagcagctgatttcagccgcgaacatcgatgagaaa
cgctggcccgcgcggcaactggccgggatcatcgacgggtggaagaatcaggcgcgcacg
cctgaccgcatcccggcagccgaagcgagcgcgtttgatggcaagggccccgcgctttat
gccgcatatcaggaacggctacgcacgctgaacgccgtcgatttcggcgacctgctgctg
cacatgctggtgattttccagacccatgaggatgttctggcgcagtatcggcgctggttt
cggttcatcatggtggacgaataccaagataccaacgtcgcgcagtatctgtggctgcgg
ctgctggcctcggagcatcgcaacatctgctgcgtcggcgatgacgatcagtcgatttac
ggctggcgcggggccgaggtgggcaacatcctgcggttcgagaaggattttcccggcgcg
cgggttatccggctggaacagaattaccgctcgaccccgcatatccttgcggctgcgtcc
ggtgtcatcgcggccaatcagggccgtttgggcaagaccctctggaccgaggagcaggac
ggcgagaaagtccgcctgatcggtcattgggatggcgaggaagaagcccgctggatcggc
gaagaactcgaatcgatgcagcagggcacccgtggtctgcggcccttcaaccttgatcaa
tgtgcgattctggtgcgcgccagccaccagatgcgcgcctttgaggatcggtttctgacc
atcggcctgccgtatcgcgtgatcggcgggccacggttctacgagcggctcgagatccgc
gatgcgatggcctatttccgcgtggcggtatcgcccgatgatgatctggctttcgagcgg
atcgtgaatacgccgaagcggggtctgggcgaaaaggcgatccagaaaatgcagatcgcc
gcacgggccaatggcgtgtcgctgtttgaaggcgcgcggctggttctggccgcgggcgat
ctggccgggcgggcaaagggccagctgaccgcgctgctggacgggttcgggcgctggcac
ggggccgtgctggaccagcgcgaaagccatgtcgagctggccgagacgattttggaagag
tccggttacgtcgcccactggcagaacgataagacccccgaagcgccggggcgtctggaa
aacctaaaggaactggtcaaggcgctggagaatttcgagaacctgcaagggtttctcgaa
catgtcgcgctgatcatggacaacgagaccgaagaaggcgggccgaaagtgtcgatcatg
acactgcacggcgccaagggtctggaattccctgcggtctttctgccgggctgggaggac
ggcttgttcccgtctcagcgcgcgatggacgagcaaggcctcaaagggctcgaagaggaa
cggcgccttgcctatgtcggcatcactcgtgccgaagagctgtgcactatctcctttgca
gcgaatcgtcggatttacggtcagtggcaatccgccttgccctcgcgcttcatcgacgaa
ttgcccgaacagcatgtcgatgtgctgacgccgcccggcctctacgggggtggctacggc
gctgcgggtatggatagcagctttggcagtggtatcgaacagcgcgccgcatcggccaac
gtatataattcgccgggctggaaacggttgcaggcgcgcggtgcgcagcgtggcatggca
cagccgcaggaaagccggaacatggtgatcgacatgaccgctgtgtcggccttcaccacc
ggtgaccgggtttttcatcagaagttcggctatggcgtggtcgctgatatcgagggcgac
aaattggaagtcgcgttcgataaggcgggccgcaaaaagatcgtcgcgaaattcgtggtc
tccgctgatgcagcggatgacgtgccgttctga

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