Pacificitalea manganoxidans: CBW24_13310
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Entry
CBW24_13310 CDS
T05128
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cmag
Pacificitalea manganoxidans
Brite
KEGG Orthology (KO) [BR:
cmag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmag03032
]
CBW24_13310
03400 DNA repair and recombination proteins [BR:
cmag03400
]
CBW24_13310
Enzymes [BR:
cmag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CBW24_13310
DNA replication proteins [BR:
cmag03032
]
Prokaryotic type
DNA Topoisomerases
CBW24_13310
DNA repair and recombination proteins [BR:
cmag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CBW24_13310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
CARME
Motif
Other DBs
NCBI-ProteinID:
ATI42883
UniProt:
A0A291M1K2
LinkDB
All DBs
Position
2922309..2925002
Genome browser
AA seq
897 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGDDYTVLASYGHVRDLPPKDGSVDPEHDFDMKWEIATDSRK
HVKAIADALASDNTLILATDPDREGEAISWHLEEALRKRKAIKKDTAVSRVVFNAITKSA
VTEAMKNPRQVDAPLVEAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVCLRLIVE
REMEIEAFRAREYWSVKAVMQTPRGQTYEARLVTLAGKKLDRYDIENETQAEMAVQAINS
RDLTVTSVEAKPGTRNPSAPFMTSTLQQEASRKFGMGARQTMSAAQRLYEAGLITYMRTD
GIDMAPEAVMAARDAIKDRFGANYVPKSPRMYKNKAKNAQEAHECIRPTDMTRDAASLRL
TDADQRKLYDLIWKRTIASQMEAARLERTTVEVGSADGQVALRATGQVLLFDGFIAVYEE
GRDDDGDDDDKRLPQISQGEPAKKGDITPEQHFTQPPPRYTEATLVKRMEELGIGRPSTY
ASIVTTIQDREYVRKDKNRLIPEDKGRLVTAFLENYFRRYVEYDFTADLEDQLDHVSAGD
RDWKDVLNRFWRDFSAAIAETSELRITEVLEKINEVLEPHIFPANPEGTDPRLCPNCGQG
RLSMRTARSGGAFIGCSNYPECRFTRPFGPPGAEGDEIGPDGKLLGEDQSEPITLRKGRF
GPYVQRGDATEEQPKPPRASLPKGWSTEDMDLSKAVMLLSLPRPVGPHPEDGEMIEAGIG
RYGPYVKHGRVYANLPSVDEVFEIGMNRAMEELAKKAARGGRGQAAKPLRELGEHPTDGG
PVNVMEGRYGPYVKWEKVNATLPKGTEPDDVTMDMAVELITAKASKKGTRKKAAPKKTAT
KTTAKKPAAKKPAAKKAPAKSTTKATTSKTAAKSTAAKSAAAKKPAAKKAAPETDAD
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcgtcgtcgtcgagtcgcccgccaaggccaagacaatcaacaaatatctgggc
gatgactacaccgttctggcgtcctacgggcatgtccgtgacctgcccccgaaggacggc
tccgtcgaccccgagcatgatttcgacatgaaatgggaaattgcgacggacagccgcaag
cacgtcaaggcgatcgccgacgcgctggccagcgacaataccctgatcctcgccactgac
cccgatcgcgaaggcgaagcgatttcgtggcaccttgaggaagccctgcgcaagcgtaag
gcgatcaagaaggacaccgccgtcagccgcgtggtgttcaacgccattaccaaatccgcc
gtgaccgaggcgatgaagaacccgcgccaggtcgatgccccgctggtggaggcgtatctc
gcccgccgtgcgctcgactatctggtgggcttcaacctgtcgcccgtgctgtggcgcaag
ctgccgggtgcgaaatccgccgggcgcgtgcaatcggtctgtctgcgcctgatcgttgag
cgcgagatggaaatcgaagcattccgtgcccgcgaatactggtccgtgaaggccgtgatg
cagaccccgcgcggccagacctacgaagcacggctggtgacgttggcgggcaagaagctc
gaccgttacgatatcgagaacgaaacgcaggccgagatggccgtgcaggcgatcaattcg
cgcgatttgaccgtcacctcggtcgaggcgaagccgggcacgcgcaatccctccgcgccg
ttcatgacgtcaaccctccagcaggaagcgagccgtaaattcggcatgggtgcgcggcag
accatgagcgcagcgcagcgcctctatgaggccggtctcatcacctatatgcggaccgac
ggcatcgacatggcacccgaggccgtgatggctgcgcgtgacgcgatcaaggaccggttc
ggcgcgaactatgtcccgaaatcgccgcgcatgtataaaaacaaggccaagaacgcgcag
gaagcgcatgaatgtattcgccccaccgacatgacccgcgatgcggcctcgctgcggctg
acggatgcggatcagcgcaagctctatgacctgatctggaaacggaccatcgccagccag
atggaagccgcgcggctggaacgcaccacggtcgaggtcggctctgccgacgggcaggtc
gcgctgcgggctaccgggcaggttctgctgtttgacgggtttatcgccgtctacgaggaa
ggtcgcgacgacgacggcgacgacgacgataagcggctgccgcagatctcgcagggggaa
cctgccaagaagggcgacatcacgcccgagcagcatttcacccagccgcccccgcgctat
accgaagcaacgctggtcaagcggatggaagagttgggcattggccggccgtccacctac
gcctccatcgtcacgacgattcaggaccgcgaatatgtccgcaaggataagaaccgcctg
attcccgaggacaagggacgcttggtcacggcgtttctggaaaactacttccgccgctac
gtggaatatgactttaccgccgatctcgaagaccagcttgaccatgtgtcggcgggcgac
cgggattggaaggacgtgctgaaccggttctggcgcgacttctccgccgccatcgcggaa
acctccgaactgcgcatcaccgaggttttggagaagatcaacgaggtgctggagcctcat
atcttcccggcgaatcccgaaggcaccgatccgcgcctgtgtccgaactgcggacagggg
cgtctgtcgatgcgcacggcgcggtctggtggcgcattcatcgggtgctcgaactacccc
gaatgccgctttacgcgtccgtttggcccgccgggggccgaaggcgacgaaatcggcccg
gatggcaagctgctgggcgaggatcagagcgagccgatcaccctgcgcaaaggccgcttt
ggcccttatgtccaacggggtgacgcgaccgaggaacagccaaagccaccgcgcgcgtcg
ctgccgaaaggctggtcgaccgaggatatggatctgagcaaggccgtgatgttgctgtcg
ctgccccgccccgtcggtccgcatcccgaggatggtgagatgatcgaggccgggatcgga
cgctacgggccgtatgtcaaacacggtcgcgtctacgccaacctgccctcggtcgacgag
gtgttcgaaatcggcatgaaccgcgcgatggaggagcttgccaagaaagccgcgcgcggg
ggccgcggtcaggccgcgaaacccttgcgcgaactgggcgagcatccgaccgatggtggc
cccgtcaacgtgatggaaggccgctatggcccgtatgtcaaatgggagaaggtcaacgcc
accctgcccaagggcacggagcccgatgacgtgacgatggacatggccgtcgaattgatc
accgccaaggcaagcaagaagggcacccgcaagaaggccgcgccgaagaagacggcgacc
aagaccactgcgaaaaagcccgccgcaaagaaacctgcggctaagaaagccccggcaaag
tccacgaccaaggcaacaacatcgaaaacagcggccaaatccacagccgccaagtctgcg
gcggccaagaaacctgccgcgaagaaagccgcgcctgagaccgacgccgactga
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