Pacificitalea manganoxidans: CBW24_14790
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Entry
CBW24_14790 CDS
T05128
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cmag
Pacificitalea manganoxidans
Brite
KEGG Orthology (KO) [BR:
cmag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmag03016
]
CBW24_14790
Enzymes [BR:
cmag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CBW24_14790
Transfer RNA biogenesis [BR:
cmag03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CBW24_14790
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ATI43146
UniProt:
A0A291M2F0
LinkDB
All DBs
Position
3229144..3229758
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AA seq
204 aa
AA seq
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MAVHLYQGDLPDGLTLGPVVAIDCETMGLQPHRDRLCLVQMSAGDGDAHLVQIAKGQTEA
PNLCAMLTDPQVLKLFHFGRFDIAVMLHTFGARAAPVYCTKIASKMVRTYTDRHGLKNLT
QELIGVDISKQQQSSDWGAETLTRAQMDYAASDVLYLHRLREALDARLAREGRTELAQAC
FDFLPTRAQLDLEGWPDSDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcatctctatcaaggcgatcttcccgacgggctgacgcttggcccggtggtg
gcgatcgattgcgaaacgatgggcctacagccgcatcgcgaccggctgtgtctggtccag
atgtcggcgggcgatggcgatgcgcatctggtgcagatcgccaaaggacagacggaggcg
ccgaatctctgcgccatgctgacggacccgcaggtgttgaagctgtttcacttcgggcgg
ttcgacattgcggtgatgctgcacaccttcggcgcgcgggccgcacccgtctattgcacc
aagatcgcttcgaaaatggtgcgcacctataccgaccgtcatgggctaaagaacctgacg
caggaactgatcggcgtcgatatttccaaacagcaacagtccagcgactggggcgcggag
acgctgacccgcgcgcagatggattacgcggcctcggacgtgctctacctgcaccgtctg
cgcgaggcgcttgacgcccggcttgcgcgggaggggcgcaccgaactggcgcaggcctgc
tttgatttcttgccgacgcgcgcgcagcttgacctcgaaggctggcctgactctgacatt
ttcgcccatagctga
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