Clostridium manihotivorum: C1I91_01095
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Entry
C1I91_01095 CDS
T08006
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cmah
Clostridium manihotivorum
Brite
KEGG Orthology (KO) [BR:
cmah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmah03400
]
C1I91_01095 (addA)
Enzymes [BR:
cmah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1I91_01095 (addA)
DNA repair and recombination proteins [BR:
cmah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C1I91_01095 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
AAA_30
AAA_12
ResIII
BEN
Motif
Other DBs
NCBI-ProteinID:
QAA30389
UniProt:
A0A410DMW1
LinkDB
All DBs
Position
complement(243512..247321)
Genome browser
AA seq
1269 aa
AA seq
DB search
MGDTRWTEEQFRAITTRGRNLLVAAAAGSGKTAVLVERIIRMITEGEEPVDIDSLLVVTF
TSAAAAEMRERIGDAISKALEHSPNSKVLQRQLALLNRSNITTMHSFCLDVIKNNFHHID
LDPNFRIGDDTEGTLIRSEVVSELFEARYDAEDDNFKRLVDAYGQGKDDSKLQQMVLDLY
QFSMSEPWPKAWLNEKCESLNINTEEELSHSEWAKILVNNVEIELQGSLKLLYNAKELCE
VTEGLELYLINLEDDINQVTNIRESICGGISAVYNSLRDFNPSKLKSVKKNQVSDEEAQQ
RVKDIRDEVKKKVNKMRDDIFAIPPEEAIKDFNTLHFLISELVSLVLEFDERYKGKKRDR
GILDFNDLEHLCLKVLTEEKEDGTIVPSAVAREFKARFSEVLVDEYQDTNNIQETIIDMV
SRKNDENPNVFMVGDVKQSIYRFRHAKPELFLNKYNSYSEQGDHDMKIMLYKNFRSRKEV
IDGVNYVFNMLMSRTVGELEYDEREALNLGADYKDLDIENIYTAQEEVSVSDIDIAGDIE
VHILDKSAKKEESEEETQDSELQEETEGSGEAEEDLDAIQIEARIVAKRIHELMNAANCK
KYMVWDKGLESYRRLKYKDIVILLRATKNWSEVFVEELGQSGIPVYADTGTGYFDTIEIR
TIMSLLQVIDNPMQDIHILSVLRSPIFLFSSEELGDLRLVDKKKYFYEIIKDIAEDEVQE
NISETLKKKCISFMEKLKVWRDKALYMPIDEFIWYLYMDTSYYGYAGAMPNGVQRQANLR
ILFQRAKQYEKTSFKGLFNFINFINKLRKSSGDMGSAKILGENEDVVRIMSIHKSKGLEF
PVVFLSGCGKQFNLMDLNKEILFHDELGFGPEYIDVDRRISYTSLPKHAIKMRFKLEALS
EEMRVLYVAFTRAKEKLIITGAVSNLEKSARRWCSSANLSEEKILSSEVLKGKSYMDWIG
MALAKHKNGEEIRMSGNTIVDYIKGDFSTWSIKYWSKADVVVDEKLEVVDEISHEEEEKR
LFIYNDIEDIRDDIDRRLGFNYKFSNATKITANISVSDLKRAAYEEDQNEILTVYKGDRI
RKPQFLQEEKGLSAAERGTIVHFVMQHIELGKVRNINEIREQIEEMILGEFLTKEQAKVV
NASKIFKFFQSGIGKRIIDAFENGSMLYRELPFFTEIPAYLVDKSLSEEEGRNELVRLQG
VVDCFFEEEDGLVLLDYKTDYVEEGNEQEIKDRYEIQLSYYADTLEKITGKKVKERYLYL
FGLDKEVKY
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgggagatacgagatggacggaagagcagtttagggcaataactactagaggtagaaat
ctattggtggcagcagctgctgggtctggtaaaaccgcagtattagtagagagaataata
agaatgataactgagggagaagaaccggtagatatagatagtttattagtagttactttt
acatctgctgcagctgccgagatgagagaaagaattggagacgctatatctaaggcactg
gaacattcaccaaactctaaagtgcttcaaaggcagctagcgctactgaatagatccaat
ataactactatgcactccttttgcttagatgttataaaaaataactttcatcatatagat
ctagatcctaattttagaattggtgatgatacagaaggtactttaataagaagtgaagta
gtaagtgagttgtttgaggctaggtatgatgctgaggatgataacttcaaaagattggta
gacgcctatggacaaggaaaagatgatagtaagcttcaacagatggtattagatttgtat
cagttttctatgagtgaaccttggccaaaagcatggcttaatgaaaagtgtgagagttta
aatattaatacagaagaggaattaagccatagtgagtgggctaagatattagttaataat
gttgagattgaattacaaggatcattgaagcttctttataacgctaaggagctatgcgaa
gttacagaaggtctagagctttacttaatcaatttagaggatgatataaatcaagtaacc
aacataagagaaagtatttgcggtggtattagcgccgtttataactcactaagggacttt
aatccatcaaagctcaagtcagtgaagaagaaccaagtatctgacgaagaagctcagcaa
agagtgaaggatataagagatgaggttaagaaaaaggtaaataagatgagagatgatata
tttgccatacccccagaagaggctattaaggactttaataccttacattttcttatatca
gagcttgtgagtttagtactagaatttgatgaaagatataaaggcaagaagagagataga
ggcatattggactttaatgatctagaacatctatgtcttaaggttcttactgaagaaaag
gaagatggcactatagttccctcagctgtggctagagagtttaaggctaggtttagtgaa
gttctagttgatgagtatcaggataccaacaatattcaagaaactataatagatatggtt
tctagaaaaaacgatgaaaatcctaatgtatttatggtcggagatgtaaagcagagtata
tatagatttagacacgctaagccagagctatttttaaacaaatacaatagctactctgag
caaggtgaccatgatatgaagataatgctttataaaaacttcagaagcagaaaagaagta
atagatggagtaaactatgtattcaatatgcttatgtctagaactgtaggtgagcttgaa
tatgatgaaagagaagctttaaacctaggagctgactataaggatttagatattgaaaat
atatatactgcacaagaggaagtcagcgtaagtgatatagatatcgcaggagatatagaa
gttcatatattagataaatcagcaaagaaagaagaatctgaagaagagactcaagactca
gagcttcaggaagaaacagaaggcagtggagaagctgaagaggatctagatgcaattcag
attgaagcaagaattgttgctaagagaatacatgagcttatgaatgctgctaactgtaaa
aagtacatggtttgggataagggcttagaaagctatagaagacttaagtataaagatata
gtaatacttctaagagcaacaaaaaactggtcagaggtatttgtagaagagcttggtcaa
agtggtattcctgtatatgcggatactggaactggttactttgatactattgaaataaga
actataatgtctctattacaggtaatagataaccctatgcaggatattcatatactatct
gtacttagatcaccaattttcttattttcttcagaagagttaggagacttaagactggtt
gacaagaagaaatacttctatgaaataataaaagacatagcagaggatgaagtacaagaa
aatatatctgaaactcttaaaaagaaatgtatcagctttatggaaaagcttaaggtatgg
agagataaagctttgtatatgcctatagatgaattcatatggtacttatatatggacacc
tcttattatggatatgcaggggcaatgcctaatggagttcaaaggcaggctaatttgagg
atattattccaaagagctaagcagtatgaaaaaacaagctttaaaggcttattcaacttt
attaacttcatcaataaactcagaaaatcctctggtgatatgggaagtgcaaagatactt
ggagaaaatgaagatgtagttagaataatgagtatacataagagtaaaggactagagttc
ccagttgtatttctatctggctgtggaaaacaatttaatcttatggatttaaacaaagag
atacttttccacgatgaactaggttttggacctgaatatattgatgtggatagaagaata
agctatacttcccttccaaagcatgctataaagatgagatttaagcttgaggccctttct
gaagaaatgagagttttatatgttgccttcactagagcaaaagaaaagcttataataact
ggagcggtgtccaatcttgaaaagtcagcaaggagatggtgttcctccgccaatcttagt
gaagagaagatactttcttcagaggttcttaaaggaaagagctatatggattggataggt
atggcccttgcaaagcacaaaaatggagaagaaataagaatgtctggcaatacaattgtg
gattatattaaaggtgacttttccacatggagtataaagtattggtcaaaagctgatgta
gttgtggatgaaaaattagaagttgtggatgaaatctctcatgaggaagaggaaaaacgt
ctctttatctacaacgatatagaggatataagggacgacattgatagaaggctaggcttt
aattataagtttagtaatgctactaagataacagctaacatatctgtttcagatcttaaa
agagcagcctatgaagaggatcaaaatgaaatattaacagtatataagggagatagaata
agaaagcctcaatttttacaagaggaaaagggtttatctgcagctgaaagaggtactata
gtgcactttgtcatgcagcatatagagcttggtaaggtaagaaatataaatgaaataaga
gaacagattgaggagatgattttaggagagttcttaactaaagaacaggctaaggtggtc
aatgcaagtaagatatttaagttcttccaaagtggtataggaaaaagaatcatagatgcc
tttgaaaatggaagtatgttatatagagaattacctttctttacagagataccagcttac
cttgtggataagtctttatctgaagaagagggtaggaatgagttagttagattacaagga
gttgtagactgtttctttgaagaggaggatggcttggtacttcttgattataagactgac
tatgttgaagaaggcaatgagcaggagataaaggatagatatgagattcagcttagctat
tacgctgataccttagaaaagataacaggaaagaaagttaaggaaagatatctatatcta
tttggattggataaagaagtgaagtattaa
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