Clostridium manihotivorum: C1I91_05725
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Entry
C1I91_05725 CDS
T08006
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cmah
Clostridium manihotivorum
Pathway
cmah03420
Nucleotide excision repair
cmah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1I91_05725 (pcrA)
03430 Mismatch repair
C1I91_05725 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmah03400
]
C1I91_05725 (pcrA)
Enzymes [BR:
cmah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1I91_05725 (pcrA)
DNA repair and recombination proteins [BR:
cmah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1I91_05725 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
C1I91_05725 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
FOG_N
NPHP3_N
DEAD
B3
ResIII
Motif
Other DBs
NCBI-ProteinID:
QAA31202
UniProt:
A0A3R5U467
LinkDB
All DBs
Position
1302604..1304907
Genome browser
AA seq
767 aa
AA seq
DB search
MDLKSLLNKEQYEAATTVDGQLLILAGAGSGKTRVLTYRIAYMLQERAIQPYNILAITFT
NKAAQEMRDRVRSLIGDKADSMWISTFHSSCVKILRREIEKLGYKKDFTIYDSYDQKALV
KECIKQLNINDKDITEQEVISKIGKAKDNLITPAQYKRQYESDFRGNKIADLYVMYQKRL
KENNALDFDDLIFKTVELFQNNPEVLDFYQNKFKYIMIDEYQDTNRCQYEFVKLLALKHK
NICVVGDDDQCIYAWRGADIRNILDFEKDYPGAKVVKLEQNYRSKANILDAANNVIKFNS
NRKSKVLRTEAEHGEKIRIYRAFSDNDEAQFIASEIKKFMEEKDLSYKDFAILYRTNAQS
RIFEDCFIKRDIPYRIIGGLKFYDRKEIKDIMAYLKVINNPADSISLRRIINVPKRNIGD
ATVAKVMEFANEFDDGLYSCLLDCENISSLSARNIASIKRFTELSEDFMDMAEQMPVSTL
IEYILDKSGYMKELKDSKEPEDQSRVENLKELVSAAVDFEKSNEEDKSLGAFLEKVALVQ
DVDNMDEEADTVVMMTVHSAKGLEFPVVFMVGMENGIFPGTASFDSESEMEESRRLCYVG
ITRARNVLYMTSAEVRKVFGRTVAYPQSDFIAEIPKELKNFVKGNTSSGLSTRSSMFASQ
GYGSGEGNRNPHSLRSGYGSGYGANQKPQKETMLDAARKLKETLDSTSGGILTKNEATMG
RKIKHPKFGIGTIIKTVTEGDDLKLTIAFDSQGIKTLLLSFAPLELL
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaagtcttttgaataaggagcagtatgaggctgctactactgtagatggt
cagcttctcatacttgcaggtgctggatcaggaaaaacaagagtattgacatatagaata
gcgtatatgttgcaagagagggccatacagccatacaatattttggccataacttttaca
aataaggcagctcaggagatgagagacagagttagatccttgataggtgataaagctgat
agtatgtggatttcaaccttccattcttcttgcgttaagatattaagaagagaaattgag
aaacttggatacaagaaggattttactatatacgacagctatgatcagaaggctttggta
aaagagtgcattaagcaacttaacataaatgataaggatataactgaacaagaagtcata
tccaagataggaaaagcaaaagataatctaatcactccagcacaatataaaagacaatat
gagagtgatttccgaggaaataaaattgcggatttatatgtaatgtatcaaaaaagactg
aaagaaaataacgccttagattttgacgatttgatatttaagaccgttgagttgtttcag
aacaatccagaagtgcttgatttttatcaaaacaaatttaaatacataatgatagacgag
tatcaggatactaatagatgtcagtatgaatttgtgaagttattggctttaaagcataag
aatatctgcgtggttggagatgacgaccagtgtatatatgcttggagaggtgcggatata
agaaatatattagactttgaaaaagattatccaggtgctaaagttgtaaagcttgagcaa
aactatagatctaaagctaatatattagatgcagcaaataatgtgattaaatttaacagc
aatagaaagtctaaggtgcttagaactgaagcagagcatggagaaaagataagaatatat
agagctttttctgacaatgatgaagctcagtttatagcttcagaaataaagaagtttatg
gaggagaaggatttatcttataaggactttgctatactttatagaacaaatgctcagtct
cgtatatttgaagattgctttataaagagggatattccatataggataatcggtggacta
aagttctatgatagaaaagaaataaaggatataatggcatatcttaaggtcataaataac
ccagcggattctataagtcttagaagaataataaatgtacctaagagaaatataggtgat
gctactgtagctaaggttatggaatttgcaaatgagtttgatgatggtctttatagctgc
ttactagactgtgaaaatatatcaagcttatcagctagaaatatagcttctataaagaga
ttcacagaactatctgaagattttatggatatggcagagcaaatgccggtttccacactt
atagagtatatattagataaaagcggatatatgaaggaactaaaagattccaaggaacct
gaagatcaaagcagagttgaaaacttaaaggaactagtttctgctgcagttgattttgaa
aagagcaatgaggaggataaatccttaggagccttcttagagaaggttgccttagttcaa
gatgtagataacatggatgaagaagctgatactgtagttatgatgactgtgcattcagct
aaggggttagagttcccagtagtatttatggtaggtatggaaaatggtatattcccagga
acagcttcctttgattcggaaagtgagatggaagagtcaagaagactatgctatgttggt
ataactagagccagaaatgtattatatatgacctcagcagaggtaagaaaggtctttgga
agaactgttgcgtatcctcaatcagactttatagctgaaatacctaaagaattgaagaat
ttcgtaaagggaaatacaagttctggactttctacaagaagttctatgtttgcaagccaa
ggctatggaagtggagaaggcaatagaaatcctcatagcctaagaagtggttacggttca
ggatatggtgcaaatcaaaagcctcagaaagaaacgatgcttgatgctgcaagaaaatta
aaggagactttagatagtacttctggcggaatccttacaaagaatgaagctactatggga
agaaagataaagcatccgaagttcggaattggtactataataaagaccgttactgaaggt
gatgatcttaagcttactattgcttttgacagccaaggcataaaaaccttactgttaagc
tttgcccctttagagctgctttaa
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