Clostridium manihotivorum: C1I91_08170
Help
Entry
C1I91_08170 CDS
T08006
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cmah
Clostridium manihotivorum
Pathway
cmah03410
Base excision repair
cmah03430
Mismatch repair
cmah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1I91_08170 (recJ)
03430 Mismatch repair
C1I91_08170 (recJ)
03440 Homologous recombination
C1I91_08170 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmah03400
]
C1I91_08170 (recJ)
DNA repair and recombination proteins [BR:
cmah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C1I91_08170 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C1I91_08170 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C1I91_08170 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
MG1
CdiI_ImmP
Motif
Other DBs
NCBI-ProteinID:
QAA31622
UniProt:
A0A3R5X102
LinkDB
All DBs
Position
1829339..1831114
Genome browser
AA seq
591 aa
AA seq
DB search
MSENWLLINKGIAEANRLVSELNISQFTSRLLVNREISDLKQARKFLFGNIEDLHDGHLM
KDMDKAVAIVKNAIHNNSKMVIYGDYDCDGVNSTVIFNNALRVCKANFSYYIPNREDEGY
GMNSNRIKKLKEEGYELIITCDNGIAAFEQVELAKELGMGVIITDHHDIPIFKEADGTVI
EKFPEADAVVNPKRPDCQYPFKKLCGAGVALKFVQCLYEALGIPKERSYDLLEFAAIATV
CDVVDLVDENRIIVKEGLKRINKSENLGLKALMKQTNLDDKTISAYHLGFIIGPCVNATG
RLETADLSVELLLTTDTERANELAKELHELNQRRQDMTTESVELIEHQIEQNNMTKDKVL
VVYNDRIHESIAGIVAGRIREKYNVPAIVLTKGKEMAKGSGRSIEEYNMFEELSNCKEYL
DKFGGHPMAAGLSIELDNIPKLREKLLKTCRLKDEDIVPKIRIDLKLPLSYINEQVVNEL
EELEPFGKGNTTPIFGEKNVEVLRLWTIGKEKNILKFRFKILGSNYSMDGICFNKYEEFK
EQFINKYGEEAFLNILDSSFCNFKMDFLFYPSVNEYNGNKSLQVIIKSIRL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaattggcttttaataaacaaaggaatagcagaggctaatagattagttagt
gaattgaatataagtcaatttacttctagactattggtaaatagagaaataagtgacttg
aagcaagcaaggaagttcttgtttggaaatattgaagacttgcatgatggtcacttaatg
aaggatatggataaagcggtagctatagtaaagaatgctatccataacaatagtaaaatg
gtgatttatggagattacgattgtgatggagtaaatagtactgtaattttcaataatgca
ttaagagtctgcaaggctaattttagctactatatacctaatcgtgaggatgaaggctat
ggtatgaatagcaatagaataaaaaagcttaaagaggaaggttatgaacttattataacc
tgtgacaatggtatcgcagcctttgaacaagtggaattagcaaaagaattaggtatgggt
gttataataacagatcatcatgacataccaatttttaaagaagctgatggaacagtgata
gaaaaatttccagaggccgatgctgttgtcaatccaaagcgccctgactgtcagtatcca
tttaaaaaactttgtggtgcaggtgtagctcttaagtttgtacaatgtctttatgaagct
ttagggatacctaaggaaaggtcttatgaccttttggaatttgcagctatagctacggtg
tgtgacgtagtagatttggttgatgaaaataggataatagtaaaagaaggtcttaaaaga
ataaataaaagtgaaaacttagggcttaaggctttgatgaaacaaactaatttagatgat
aagactataagtgcctatcatttaggatttataataggaccttgcgtaaatgctacagga
agacttgaaactgctgatctatctgttgagcttttgcttacaacagatactgagagagca
aatgaattggctaaagagcttcatgagcttaatcaaagaagacaagatatgactacagaa
agtgtagaacttatagagcatcagatagaacaaaataatatgacaaaagataaggtctta
gtggtatataatgataggatacatgaaagtatagctggtatagtggcaggaagaataaga
gaaaagtataatgttccagctatagttttgaccaagggaaaagagatggcaaaaggctct
ggaaggtcgatagaagaatataatatgtttgaagaactttcaaactgcaaggagtactta
gataagtttggtgggcatcctatggcggcagggttgtctatagaacttgataatatacca
aagctaagagaaaaattgttaaagacctgtaggttaaaggatgaagatattgttcctaag
ataagaatagatctaaagcttcccttatcatacattaacgagcaagtagtcaatgaactt
gaagagttagagccttttggtaaaggaaatactactcctatatttggagagaaaaacgtt
gaagtattaaggctttggaccatagggaaagaaaagaatatattaaaatttagattcaag
atattaggcagtaattatagtatggatggtatatgctttaataagtatgaagaattcaaa
gagcagtttattaataagtacggtgaagaggcctttttaaatatcttagatagctccttc
tgtaacttcaagatggattttcttttctacccttctgttaatgaatacaatggtaacaag
agtcttcaagttataataaagagtataaggctgtag
DBGET
integrated database retrieval system
