Clostridium manihotivorum: C1I91_13655
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Entry
C1I91_13655 CDS
T08006
Name
(GenBank) AP endonuclease
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
cmah
Clostridium manihotivorum
Pathway
cmah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1I91_13655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmah03400
]
C1I91_13655
Enzymes [BR:
cmah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
C1I91_13655
DNA repair and recombination proteins [BR:
cmah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
C1I91_13655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF2334
Motif
Other DBs
NCBI-ProteinID:
QAA32598
UniProt:
A0A410DUC7
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All DBs
Position
complement(3013646..3014464)
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AA seq
272 aa
AA seq
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MEKLLFGISGLPIGDSQNKFTYKTGIEYLHSIGLDAMELPFVRSINVTDKNRQSILDIKN
EHNFYLSAHGSYFINLNAIEEEKREKSKERILNGANALKSVGGRSLVFHPGYYLDSTYEE
AFENIKRELLDLDYNGVDYRLETTGKPTQFGSYEELVRLCKEVPTCKLCVDFSHVHARGN
GILKDYADFAKIFDLIGTELGKEALQDLHVHLSGIAYTVKGEKNHLPFEESDFNYKACLK
AFVDFDVKGCIVCESPILEKDALLLKNTYESL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagctactattcggaatttcaggactaccaataggtgatagtcaaaataaattt
acttacaaaacaggaatcgagtatcttcactcaataggcttagatgctatggagcttcct
tttgttagatccattaatgttacagataaaaatagacaatctattttggatataaaaaat
gaacataatttctatctatctgcccatggttcgtacttcatcaatctaaacgcaattgaa
gaagaaaaaagagagaagtcaaaagaaagaattttaaatggtgccaacgcattaaaatct
gttggcggaagaagtctagtattccaccctggttactatctcgattctacctatgaagaa
gctttcgaaaatataaaaagagaattgctagatttagattataatggagtagattataga
ttagaaaccacaggaaaacctactcaatttggttcctatgaagaacttgtgagattatgt
aaggaagtaccaacttgcaaactttgtgttgatttctctcatgttcacgctagaggaaat
ggaatactaaaggattatgctgattttgcaaagatctttgatttgattggaactgagctt
ggaaaagaagctctacaagacttgcatgtacatctatccggtatagcatatactgttaaa
ggagagaaaaatcatttaccttttgaagaaagtgattttaattacaaagcttgtttaaaa
gcttttgtggactttgatgttaaaggctgcattgtttgcgaaagtcctatattagaaaaa
gatgccttacttttgaaaaacacctatgaaagtttatag
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