Clostridium manihotivorum: C1I91_17025
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Entry
C1I91_17025 CDS
T08006
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cmah
Clostridium manihotivorum
Brite
KEGG Orthology (KO) [BR:
cmah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmah03016
]
C1I91_17025
Enzymes [BR:
cmah01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C1I91_17025
Transfer RNA biogenesis [BR:
cmah03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C1I91_17025
Prokaryotic type
C1I91_17025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
SWAP1_C
Motif
Other DBs
NCBI-ProteinID:
QAA33205
UniProt:
A0A3R5QZJ3
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All DBs
Position
complement(3767147..3768025)
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AA seq
292 aa
AA seq
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MNGIININKSTGMTSFDVVRKVRFLTKEKKVGHTGTLDPEASGVLPVCMGKATKIIDYIM
ENQKSYRVTFKLGVITDTYDLEGTIIKTSPTDHIKEEEVAEVISKFVGEIEQVPPMYSAL
KVNGKRLYELARQGKEIERQARKISIYDIANIDINLPFVSMDVTCSKGTYIRSLCFDIGE
QLKVGAVMTALCRTANGAFTLENGVTLEELEKSNISDYIISIEEALKFYDSITVNDKFAK
LLINGVRVSDNSMVKEKLDFDRLYRVYSKEKSLIGLGKMNRDGFKLEKLLLD
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggataataaatataaataagagcacagggatgacttcttttgatgtggttagg
aaagtaagatttttaaccaaggagaaaaaggtcggacatacaggaacccttgatcctgaa
gcttcaggggttcttcctgtttgcatgggaaaagcaactaagataatagattatattatg
gaaaatcaaaagtcctacagagtaacctttaagctaggcgttataacagatacatatgat
ttagaaggaactattataaaaacttctccaactgaccatatcaaggaagaagaagttgct
gaggtaatatctaaatttgtaggcgagatagaacaagttccgccaatgtattcagcactt
aaagtaaacggaaagcgattgtatgaacttgctaggcaaggtaaagaaattgagcgacaa
gcaagaaaaatatctatatatgatatagcaaatatagatataaacttaccttttgtatcc
atggatgtaacttgttctaaagggacttatataagaagcttatgttttgatataggagaa
cagttaaaggttggcgctgtaatgactgcattatgtagaacagctaatggtgcgtttact
ttagagaatggtgttacgctagaggagttagagaaatccaatataagcgattatattatt
tcaattgaagaagcactaaagttttatgatagcattaccgttaatgataagtttgctaag
ctattaattaatggggtaagagtgagtgacaatagtatggttaaagaaaaacttgacttt
gataggttatatagagtatatagtaaagagaagtctttaattgggctaggtaaaatgaat
agggatggctttaagttagaaaaattattattagattag
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