Clostridium manihotivorum: C1I91_17125
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Entry
C1I91_17125 CDS
T08006
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cmah
Clostridium manihotivorum
Brite
KEGG Orthology (KO) [BR:
cmah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmah03032
]
C1I91_17125
03400 DNA repair and recombination proteins [BR:
cmah03400
]
C1I91_17125
Enzymes [BR:
cmah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C1I91_17125
DNA replication proteins [BR:
cmah03032
]
Prokaryotic type
DNA Topoisomerases
C1I91_17125
DNA repair and recombination proteins [BR:
cmah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C1I91_17125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
Toprim_2
DUF2621
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
QAA33224
UniProt:
A0A410DVV5
LinkDB
All DBs
Position
complement(3785865..3787949)
Genome browser
AA seq
694 aa
AA seq
DB search
MGQNLVIVESPAKAKTISKYLGKNYVVEASMGHIRDLPKSQLGVDVENNYNPKYITIRGK
GDLLDKLKKLAKKSDKIFLATDPDREGEAISWHLANILKIPDKDKCRVEFHEITKNAVKT
SIKSPRVINQNLVDAQQARRVLDRLVGYEISPILWKNVKWGLSAGRVQSAALKLICDREE
EINKFESKEYWTVDIKLEKKDKKFNVKIATLKGKKFEIFTEEEANKTIEELKQNEFVVSK
VKKGTKNKNPLPPFTTSTLQQDASRKLNFQTKRTMSIAQQLYEGIEVKGYGTVGLITYMR
TDSVRISKEAQDSALQYINTNYGEKYAPKVPRVYKGKKNIQDAHEAIRPSVIDITPEVAK
ENLSAEQYKLYKLIWERFIASQMESCVLNTNSIDITNGEYKLRASGSTIKFDGFMKVYEY
TTEEDDESVLLPEIEENEALSYDSIVGKQHFTQPPARYTEASFVKLLEEKGIGRPSTYVP
TISTLLSRKYIQREKKNLMATELGIIVNTIMSDYFKQIVDADFTADMENKLDYIEEGKEE
WTRIVDEFFSPLSEAIDKAEKEVSKVVIEDKVSDVKCDKCGRMMVIKQGRFGSFLACPGY
PDCQNTKPIVEEIDAKCPLCGGGVVIKKSKKGNKFYGCSNYPECSFVSWYEPAKENCSNC
GSHMVIKYNKTKGKFMECTNKECGNKVPIQNEEK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaaatcttgtaatagtagaatcgcctgctaaggcaaaaacaataagtaaatac
ttaggtaaaaattatgtggttgaagcatcaatgggacatattagggatttgcctaagagt
caacttggagttgatgtggaaaacaattataatcccaaatatataactataagaggaaaa
ggtgatcttttagataagcttaaaaagcttgctaaaaaaagtgataaaatatttttggca
actgaccctgatagagaaggggaagctatttcttggcaccttgcaaatattttaaagatt
ccagataaagataaatgtagagttgagtttcatgagattacaaagaatgctgttaagact
tctataaagagcccaagagttatcaatcaaaacttagttgatgctcaacaagctagaaga
gtacttgataggctagttggttatgaaataagcccaatattatggaaaaatgttaaatgg
ggcttgagtgctgggagagttcaatctgctgctcttaaactgatttgtgatagagaagaa
gaaataaataaatttgaatcaaaagaatattggactgttgatattaaactagaaaagaaa
gataaaaagtttaatgtgaagattgcaactttaaaaggtaagaagttcgaaattttcacc
gaagaagaagcaaataagacaatagaagaacttaaacagaatgaatttgtagtaagtaag
gtaaagaaaggtacaaagaacaaaaatcctttacctccattcactacaagtacactacaa
caggatgctagtagaaagcttaattttcaaacaaagagaactatgtctatagctcagcaa
ttatacgaaggtattgaagttaaaggttatggaactgtaggacttataacatatatgaga
acggattctgttagaatatcgaaagaagctcaagatagtgcactacaatatataaacact
aattacggtgaaaaatatgcgccaaaggttccaagagtttataagggaaagaagaatata
caagatgcccatgaagctataagaccttcagttatagatattacaccagaagttgcaaag
gaaaatctttcagcagaacagtacaaactttataaacttatttgggaaagattcatagca
agtcaaatggaatcttgtgttctcaacacaaatagcattgatatcacaaatggagaatat
aaattaagagctagtggctctactataaagtttgatggatttatgaaagtttatgaatat
accacagaggaagatgatgaaagtgtattacttcctgaaatagaagaaaatgaagcttta
agttatgatagtatagttggaaaacaacacttcactcaaccgcctgcaagatatactgag
gcatcttttgttaagctgttagaagagaaggggattggtagaccaagtacttacgtacct
actatttcaacacttcttagtagaaagtatattcaaagagaaaagaaaaatttaatggct
actgagcttggaattatagtaaatactataatgagtgattactttaagcaaatagttgat
gcagactttacagcagatatggaaaataagctagattatatagaagaaggaaaagaagaa
tggacaagaattgtagatgaattcttcagtcctcttagtgaagctatagataaagctgaa
aaggaagtatctaaagtagtaattgaagataaagtaagtgatgtaaagtgtgataagtgt
ggaaggatgatggtaataaagcaaggtagatttggtagctttttagcgtgcccaggctat
cctgattgccaaaacactaaacctattgtagaagagattgatgcaaaatgccctctttgt
ggtggtggtgtagtaattaagaaaagtaaaaaaggtaataagttttatggatgttcaaat
tatccggaatgttcttttgtaagctggtatgaacctgcaaaagaaaattgcagtaactgc
ggttctcatatggttatcaagtataataaaacaaaaggtaaatttatggagtgtacaaat
aaagaatgcggtaataaagttccaattcaaaacgaagaaaagtag
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