Clostridium manihotivorum: C1I91_24980
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Entry
C1I91_24980 CDS
T08006
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cmah
Clostridium manihotivorum
Pathway
cmah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1I91_24980 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmah03019
]
C1I91_24980 (recQ)
03400 DNA repair and recombination proteins [BR:
cmah03400
]
C1I91_24980 (recQ)
Enzymes [BR:
cmah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1I91_24980 (recQ)
Messenger RNA biogenesis [BR:
cmah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C1I91_24980 (recQ)
DNA repair and recombination proteins [BR:
cmah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C1I91_24980 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
QAA34624
UniProt:
A0A410DZZ7
LinkDB
All DBs
Position
complement(5607951..5609732)
Genome browser
AA seq
593 aa
AA seq
DB search
MDNTLRVLKKVFGFSSFRKGQREIIETILSGKDVFAVMPTGGGKSICYQIPAILMGGVTL
VISPLISLMKDQVDSIKDVGINAAFINSTIDKNKIIEIIEDSLIGKYKLIYISPERLEME
YFVKLIRSLNISQIAVDEAHCVSQWGHDFRKSYRFILPFVNSLAKRPVITAFTATATEEV
RNDSVKLLGLINPYLHISSFNRDNLSINIHKEVDKLEFVKDVIRDREEESGIIYCSRRKD
VDGLYSYLKERGYNVAKYHSGLKDEEKEAFQDDFLFDRKEIMIATNAFGMGIDKSNVRYV
IHFSLPKNIENYYQEIGRGGRDGEKCDCHLLYSREDIPSMEYMINTSTLLNRREIELRKL
QAMVDFCETQNCYRQFILNYFGEGTVKQYCNNCSNCLNSDELRDITVEAQKILSCLYRTK
ERYGISVIVDILRGFSGPKIIDNKLNELSTYGIMQEYSSKFIKDVIQTLIEEGYVDRKEG
TYSMIRLNSKSINILKGKEKVMARLKDSVDDTVLDQELFKKLRILRRDLSQSEKVKPYII
FSDSTLIQIANLRPKSREELMNIRGVGEKKIEKYGDRVLRVVHNHTLIKSKVN
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggataatacattgagggtattaaaaaaagtatttggcttttctagctttagaaaaggc
caaagagaaataattgaaactatattaagtggaaaagatgtatttgcggttatgcctact
ggaggtgggaagtctatctgctatcaaataccagccattcttatggggggcgtgactttg
gtaatttctccactaatttctcttatgaaggatcaagttgatagtataaaagatgtggga
ataaatgctgctttcattaatagcactatagataagaataaaataatagaaattatagaa
gattcgcttataggaaaatataagctaatatatatatcgccagagagattagaaatggag
tactttgttaagctaattaggagtttaaatatatcacagatagctgtagatgaagctcat
tgtgtatctcaatggggacatgattttaggaaaagctatagattcatacttcccttcgta
aattcattagcaaagagaccggtaataacagcctttacagctactgccaccgaagaggta
agaaatgatagtgttaagttattgggcctaataaacccatatctacatataagtagtttt
aatagagataatttatctataaatattcataaagaagtagataagcttgaattcgttaaa
gatgtaataagagatcgggaagaagagtctggaataatatattgttctagaagaaaagac
gtagatggattgtatagttaccttaaggaaagaggatacaatgtagctaagtatcacagt
ggacttaaagatgaagaaaaggaagcttttcaagatgattttctttttgatagaaaggaa
ataatgatagccaccaatgcttttggtatgggaattgataagtcaaatgtaaggtatgta
attcatttctcattgcctaagaatatagaaaactactatcaagaaattggtagaggtggc
agagacggtgaaaaatgcgattgtcatctattatattctagagaggatatcccctctatg
gagtatatgatcaatacgtcaaccttacttaatagaagagagatagagctaagaaagctg
caggcaatggtagatttctgcgagactcagaactgttatagacagtttatactaaattac
tttggagaaggaacagtaaaacaatattgtaacaactgttcaaactgcttaaacagtgat
gagttaagagatataactgttgaggctcagaagatactatcctgtttgtatagaactaag
gaaaggtatggaatttcagtaatagtagatatattaagagggttttctggacctaagata
atagataataaattgaatgagctttcaacttatggaattatgcaagagtatagtagtaaa
ttcataaaggatgtaattcagactcttatagaagaaggttatgtagacagaaaagaagga
acttattccatgataaggcttaatagtaagtctatcaatatacttaaaggaaaagagaag
gttatggctaggcttaaagattctgtggacgatacggtgttagatcaagaattgtttaag
aagctaagaatacttagaagagacctgtctcaaagtgaaaaggtgaaaccttacataata
ttttctgattcaactcttatacagattgcaaatctgagacctaagagcagggaagaatta
atgaacatacgaggtgttggagagaagaagattgagaagtatggagatagggtgcttaga
gtagtacataaccacactttaataaaaagcaaagtaaattga
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