Cobetia marina: BFX80_00805
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Entry
BFX80_00805 CDS
T04789
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cmai
Cobetia marina
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmai03400
]
BFX80_00805
Enzymes [BR:
cmai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BFX80_00805
DNA repair and recombination proteins [BR:
cmai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BFX80_00805
Prokaryotic type
BFX80_00805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AOM02717
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All DBs
Position
complement(177151..178602)
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AA seq
483 aa
AA seq
DB search
MQLVWLRSDLRVHDNTALSQAAARGPVVAVVTPCYAQWMTHGHGANKLDFLRRGLHVLQQ
ALAGHHIPLKVLDCDTFAEVPEALATLCTQLGAQALHFNDEYAVNERERDRLVRARLADS
DIRLHRYTDMLAFTPGELLTGKGDYYGVFTPFSKRWHKEIDARRLALNEAPAVQDAPRDA
EGREISGDAIPALPDTLSVDVEHGPSEPLEAERWPAGEDAAQERLERFMTFRARRYHEQR
DLPATRGTSELSPYLALGMISARQCYAAVLAENGSLADGDVGLTTWVNELIWREFYQHIL
VGFPRVNRHRPFQRHTEALQWRDDDAGFAAWCEGRTGYPIVDAAMRQLVETGWMHNRLRM
VTAMFLTKHLLIDWRRGEAYFLAHLVDGELGANNGGWQWAASTGTDAAPYFRIFNPTTQG
QRFDKDGDFIASFVPELADLPAKRRHQPTADDCHACGYPRPIVDHKAARQRALDAFKALT
RSE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
ctgcagctcgtgtggctgcgaagcgacctgcgcgtgcatgacaataccgccctctcgcaa
gcggccgcacgcggcccggtggtggcggtggtcaccccctgctatgcccagtggatgacc
catggtcatggtgccaacaagctcgacttcctgcgtcgcggtctgcacgtcctgcagcag
gcactcgccggccatcacatcccgctcaaggtcctcgactgcgacaccttcgcggaagtg
cccgaagcgctggccacgctgtgcacgcaacttggcgcccaggcgctgcacttcaatgac
gagtacgccgtcaatgagcgcgagcgcgacagactcgtccgcgcgcgcctggccgacagc
gacatccgcctgcatcgctacactgacatgctcgccttcacgcccggcgaactgctgacc
ggcaagggcgattactacggcgtcttcacgcccttctccaagcgctggcacaaggagatc
gacgcgcggcgtctggcgctcaatgaggctcccgcggtgcaggatgcgccccgagacgcc
gagggacgcgagatttcgggagacgccattcccgcgcttcccgacacgctaagcgtcgac
gtggaacatgggccgagcgagccgctggaggcggagcgatggcctgccggcgaggatgcc
gcccaggagcgcctggagcgcttcatgaccttccgggcgcgccgctaccacgagcagcgc
gacctgcccgccacgcgcggcaccagcgaactgtccccctatctggcgctcggcatgatc
tcggctcgacagtgctacgcggcggtattggcggaaaacggcagtctcgccgacggtgat
gtcggcctgaccacctgggtcaacgagctgatctggcgcgagttctaccagcacatcctg
gtcggctttccgcgcgtcaatcgccaccgtcccttccagcgccataccgaagccctgcaa
tggcgcgatgatgacgcaggcttcgccgcctggtgcgaagggcgtaccggctaccccatc
gtcgatgccgccatgcgccagctggtcgagaccggctggatgcacaatcgcctgcgcatg
gtgacggccatgttcctcaccaagcacctgttgatcgactggcgccgtggtgaggcctac
ttcctggcgcacctggtggatggtgaattgggggccaacaatggcggctggcagtgggcc
gcctcgaccggcaccgatgccgcgccctatttccgcatcttcaaccccaccacccagggg
caacgcttcgacaaggacggcgacttcatcgcaagcttcgtgcctgagctggccgacctt
cccgccaagcgtcgtcaccagcccacggctgacgactgccatgcctgtggctacccgcgc
ccgatcgtcgaccacaaggccgcccgccagcgagccctcgatgccttcaaggcgctcacc
agaagcgaatga
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