Cobetia marina: BFX80_00835 Help Entry BFX80_00835       CDS       T04789                                  Name (GenBank) RNA polymerase-binding ATPase   KO K03580   ATP-dependent helicase HepA [EC:5.6.2.-] Organism cmai  Cobetia marina Brite KEGG Orthology (KO) [BR:cmai00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cmai03021]     BFX80_00835 Transcription machinery [BR:cmai03021]  Prokaryotic type   Bacterial type    Other transcription-related factors     RNA polymerase-associated proteins      BFX80_00835 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RapA_C Tudor_1_RapA SNF2-rel_dom Helicase_C Tudor_RapA ResIII DEAD NAT10_TcmA_helicase Flavi_DEAD Cas3-like_C_2 Motif Other DBs NCBI-ProteinID:  AOM00132 UniProt:  A0ABU9GI04 LinkDB All DBs Position complement(183598..186540) Genome browser AA seq 980 aa AA seqDB search MSDFIPGQRWISDGEADLGLGTILNVDFRTVTVLFAASEETRTYSLREAPLTRVAFGNGD RIQSDDGEWLIVDDSKEVRGQILYICEREGESAGELLELPEARLNDKMQFNQARDRLLTG QVDRNDWFDLRYRTLRHFHRVEQSPALGLSGPKVDLVPHQLYIADEVSRRHAPRVLLADE VGLGKTIEAGLILHRLLLSGRARRALILVPASLTHQWLVEMLRRFALDVSLLDEEQCKAH GTRNPFEGNQIILASQDWLFANPSRQVQAAACDWDMLIVDEAHHLDWSEDKVGPGYACVE SLARQTAGVLLLTATPEQMGLESHFARLRLLDPERYHDLERFKAEEEGYVAVASAIDSLD ALPTDTSGLDSLTAVLDDGDSRALLETLMDSDSDDAQRDSARRQLRDQLLDRHGTGRVMF RNSRTHVEGFPERRLHVHELELPSSYRRVVRKLERDEDYLDDLLIETGMNHPEVVLFLDE MYRALPDDRMNAEPWWQIDPRVMWLLETLTDLGNEKALVICHTADTARELSEGLRVLGGV HAPVFHEGMSLVERDRAAAAFASEEEGVQLLVCSEIGSEGRNFQFCHHLVMFDLPVHPDQ LEQRIGRLDRIGQQFPIEIHVPVFEGSPGAQLLRWYRDGMDAFSAPHGIGSELYSQFGDE LEEALLDSEEIDSIIEQTRERFDALQAERQSGRNRLLELNACRHERAAEVIAAIETLDND KALPGYLERAFDIFGIESRDLGDGITYLAPGPHMLDGLPGLVKGEEGFSVTSDRATALSR EDVQHLSWEHPLVREMLVRIIDGSMGNTALALLKHPAIPGGRLMTEVVFRTQSTAPRGLR LGRFLPPTAIRVLLDENGSNLSDKVSFGGLAKNLKPVKKAVARDLIKQSHATLRKLMSDA EQEAERELPSIVEQAQQQMREQLSAELARLEALASHNPSVREEELEALRQERAALDGAIE TTRLRLDSVRVIVTVDAHER NT seq 2943 nt NT seq  +upstreamnt  +downstreamnt atgagcgacttcattcccggtcagcgctggatcagtgatggtgaggccgatctcggcctt ggcacgatcctcaatgtcgatttccgcacggttaccgtcctctttgccgccagcgaagaa acccgcacctacagcctccgcgaggcgcccctgacccgagtcgccttcggcaatggcgac cgcatccagtccgacgatggcgaatggctgatcgtcgatgactccaaggaagtgcgcggc cagatcctctacatctgtgaacgtgaaggcgaaagcgccggcgagctgctcgagcttccc gaggcacgcctcaacgacaagatgcagttcaaccaggcccgtgaccgcctgctgaccggc caggtcgaccgcaatgactggttcgacctgcgttaccgcaccctgcgccacttccatcgt gtcgagcagagccccgcgctgggcctgtccggccccaaggtcgacctggtaccgcaccag ctgtacatcgccgatgaggtctcgcgccgtcacgcaccgcgcgtgctgctggccgatgaa gtcggcctgggcaagaccatcgaagccggcctgatcctgcatcgcctgctgctcagcggt cgtgcccgtcgcgccctgatcctggtaccggcgagcctgacccaccagtggctggtcgag atgctgcgccgcttcgcgctggatgtctcgctgctcgatgaagagcaatgcaaggcccac ggcacgcgcaaccccttcgaaggcaaccagatcattctggccagccaggactggctgttc gccaatccgtcacgtcaggtccaggctgctgcctgcgactgggacatgctgatcgtcgat gaagcccaccacctcgactggagcgaagacaaggtcggcccgggctatgcctgcgtcgaa tcactcgctcgccagaccgccggtgtgctgctgctgaccgccacgccggagcagatgggg ctggagagccacttcgcgcgcctgcgcctgctcgacccggagcgctaccacgacctggag cgcttcaaggccgaggaagagggttacgtcgccgtggcctcggccatcgacagcctggac gccctgccgactgacaccagcggcctggacagcctgaccgccgtgctggatgacggcgac agccgcgccctgctcgagaccctgatggacagcgacagcgatgacgcccagcgcgacagc gcccgtcgtcagctgcgtgaccagctgctcgaccgccacggcactggccgcgtgatgttc cgcaactcgcgcacccacgtcgaaggcttccccgagcgtcgtctgcacgtccacgagctg gagttgccctcctcctaccggcgtgtggtgcgcaagctggagcgtgacgaggactacctc gatgacctgctgatcgagaccggcatgaaccaccccgaggtggtgctgttcctcgacgag atgtaccgcgccctgcccgatgaccgcatgaacgccgagccctggtggcagatcgacccg cgcgtcatgtggctgctggaaaccctgaccgacctcggcaacgagaaggcgctggtgatc tgtcacaccgccgataccgcgcgtgagctgtccgaaggtctgcgcgtgctgggcggtgtg catgcaccggtcttccatgagggcatgagcctggtcgagcgtgatcgcgccgccgccgcc tttgcctccgaggaagaaggcgtgcagctgctggtgtgctcggaaatcggctcggaaggc cgtaatttccagttctgccaccacctggtgatgttcgacctgccggtgcatccggaccag ctcgagcagcgcatcgggcgtctggaccgcatcggccagcaattcccgatcgagatccac gtaccggtcttcgaaggctcaccgggcgcccagctgctgcgctggtaccgcgatggcatg gacgccttcagtgcgccccacggcatcggcagcgagctgtattcccaattcggtgacgag ctggaagaagccctgctcgacagcgaagagatcgacagcatcatcgagcagacccgcgaa cgcttcgacgccctgcaggccgagcgccagtccggtcgcaaccgtctgctggaactcaat gcctgtcgtcacgagcgcgccgcggaagtcatcgccgccatcgagacactggacaacgac aaggcgctgccgggctacctggagcgcgccttcgacatcttcggcatcgagagccgtgac ctcggcgatggcatcacctacctggcaccaggcccgcacatgctcgacggcctgccgggg ctggtgaagggcgaggaaggcttcagcgtcaccagcgaccgcgccacggcgctgtcacgc gaagatgtccagcatctgtcgtgggagcacccgctggtccgcgagatgctggtgcgcatc atcgatggctccatgggcaacacggcgctggcactgctcaagcacccggcgatcccgggc ggtcgcctgatgacggaagtggtgttccgcacccagtccaccgcaccgcgcggcttgcgc ctgggtcgcttcctgccaccgaccgccatccgggtgctgctggatgaaaacggcagcaac ctgtccgacaaggtctccttcggcgggctggccaagaacctcaagccggtcaagaaggcg gtcgcgcgtgatctgatcaagcagagccacgcgacactgcgcaagctgatgagcgacgcc gagcaggaagccgagcgcgaactgccgagcatcgtcgagcaggcccagcagcagatgcgt gagcagctcagtgctgagctcgcccgcctcgaagcattggccagccacaacccgtcggtg cgcgaggaagagctggaagcgttgcgccaggagcgtgccgctctcgatggcgccatcgag accacgcgtctgcgtctggacagcgtgcgcgtcatcgtcaccgtggatgctcacgaacgt tga

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