Cobetia marina: BFX80_01245
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Entry
BFX80_01245 CDS
T04789
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
cmai
Cobetia marina
Pathway
cmai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BFX80_01245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmai03400
]
BFX80_01245
Enzymes [BR:
cmai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
BFX80_01245
DNA repair and recombination proteins [BR:
cmai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BFX80_01245
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BFX80_01245
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BFX80_01245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AOM00195
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All DBs
Position
272606..274081
Genome browser
AA seq
491 aa
AA seq
DB search
MAEPTFLWHDYETFGADPRRDRPSQFAAIRTDAELNEIGEPLTLFCKPADDFLPHPMACL
ITGITPQQAERRGLPEAEFAGRINDEMSVPGTCSVGYNSLRFDDEVSRHLFYRNFLDPYG
REWQNGNSRWDLIDVVRAFHALRPEGIEWPRREDGAPSFRLEDLTAANGIEHAGAHDALV
DVRATIALARLLKSRNARLFEYLLKLRNKRHVASLLDIGARKPMLHISRRYPASRACGAL
VVPLAEHPSNANGVIVYDLSVDPAPLMDLTPEEIRARVFASADDLAEGEERIPLKVIHLN
KSPVLMPATALKDVSGPHQGEYGEIVARLKLDPARCREHWKWLKDNAGVGVKVAQVFAET
PPAGPADPDLMLYSGGFFSPADRKEMERVRASHPEALDDTPFAFQDGRLEEMLFRYRARS
YGYTLDSAERERWEQWRWERMNDEQVASLTVKGFVSEIQRLAQNEQDSARVQILEELAMY
VEGIMPPQAFG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagcccaccttcctgtggcacgactacgagaccttcggcgccgacccgcgccgc
gaccgtccatcgcagtttgccgccattcgtactgatgcggagctcaacgagatcggtgag
ccgctgacgctcttctgcaagcccgctgacgacttcctgcctcatccgatggcatgcctg
atcacggggatcacgccgcagcaggccgagcgtcgcggcctgccggaggccgagttcgcc
gggcgcatcaacgacgagatgagcgtgccgggcacctgctcggtgggctacaacagcctg
cgtttcgatgatgaagtcagccgtcacctgttctatcgcaacttcctcgacccctacggg
cgtgagtggcagaacggcaattcgcgctgggacctgatcgatgtggtgcgtgccttccat
gcgctgcgccccgaggggatcgagtggccccggcgcgaggacggagcccccagcttccgt
ctggaagatttgacggccgccaatggcatcgagcatgccggcgcgcacgatgccctggtc
gatgtgcgggccaccatcgccctggcgcgtctgctcaagtcacgcaatgcccggctgttc
gagtatctgctcaagctgcgcaacaagcgtcatgtcgccagcctgctggacatcggtgcg
cgcaagccgatgctgcacatctcacgtcgctatccggcctcgcgagcatgcggtgcgctg
gtggtgccgctggcggagcacccctccaatgccaatggcgtcatcgtctatgacctgtcg
gtggacccggcaccgctgatggatctcactcccgaggagattcgggcgcgggtgttcgcc
agtgcggatgacctggcggaaggtgaggagcgcatccccctcaaggtcattcatctcaac
aagagtccggtgctgatgccggcgacggcgctcaaggatgtctccggccctcaccagggg
gaatacggcgagatcgtcgcgcgcctcaagctcgaccctgcacgatgtcgtgagcactgg
aagtggctcaaggacaatgcgggggtcggagtgaaggtcgcccaggtgtttgccgagacg
ccgccggccggcccggctgacccggacctgatgctctattcgggaggcttcttctcgccc
gcggaccgcaaggagatggagcgcgtgcgtgcctctcaccccgaggcgctggatgacacg
cccttcgccttccaggatgggcgactcgaggagatgctgttccgctaccgcgcacgcagc
tacggctacacgcttgattcagccgagcgggagcgctgggagcagtggcgctgggagcgc
atgaatgacgagcaggtcgccagcctgaccgtgaagggcttcgtcagcgagatccagcgt
ctggcccagaacgagcaggattcggcgcgcgtgcagattctggaagaactggcgatgtat
gtggaaggcatcatgccgccacaggcctttggctga
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