Cobetia marina: BFX80_03460
Help
Entry
BFX80_03460 CDS
T04789
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cmai
Cobetia marina
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmai03016
]
BFX80_03460
Enzymes [BR:
cmai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BFX80_03460
Transfer RNA biogenesis [BR:
cmai03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BFX80_03460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AOM00530
LinkDB
All DBs
Position
842824..844011
Genome browser
AA seq
395 aa
AA seq
DB search
MSDQSAATALLSELDFDAIWVETPEALAAACAELEGADWLALDTEFIRESTFFPIPALVQ
LMAARDGELPGADGKTPRIFLIDPTVVPASDALKRLLGPEGPLKLLHACGEDMEVFLRWA
GVAPAPLIDTQIAEGLTGGEASMGYQRLVERVAGITVPKEETRSNWLKRPLSQAQCDYAA
LDVLFLPQVWAQQREALNQLGRMAWLEEDCSAPGSSGGATPDPEYWKRHRSLWKLTPRGL
AAWQSLCEWREAQIRLRDVPRSRLLADAQLFAICERLPVNRFELAKVEGLHPPQIKRIGD
SVLEILKDVAMIDDSQLPRVPPSPLAPEWKARMKRLKREVNAVAEAQDLKPEILGKRRDM
EALVIADYEGEPLPLPGGWRGALLAERLAKAFQPE
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcaatccgccgccaccgcactgctgtcagagctagacttcgacgccatctgg
gtcgagacccccgaagcgctggccgctgcctgtgccgaacttgagggcgccgactggttg
gcgctggacaccgagttcatccgtgagtccaccttcttcccgattccggcactggtgcag
ctgatggcggcccgcgatggtgagctgcctggtgcggatggcaagacgccgcgcatcttt
ctgatcgaccccacggtggtgccggccagtgacgcgctcaagcgtctgctgggtcctgag
gggccgctcaagctgctgcatgcctgcggcgaggacatggaagtcttcctgcgctgggcg
ggcgtggcgccggcaccgctgatcgatacccagatcgccgaagggctcacgggtggcgag
gcctccatgggctatcagcgtctggtcgaacgtgtggccggcatcacggtgcccaaggaa
gagacgcgctccaactggctcaagcgtccgctgagtcaggcgcagtgtgactatgccgct
ctggacgtgctgttcctgccgcaggtctgggcacagcagcgtgaggccctgaatcagctg
ggtcgcatggcctggctggaagaggactgcagtgccccgggcagcagcgggggtgccacg
ccggacccggagtactggaagcgccatcgcagcctgtggaagctcacgccgcgtgggctg
gccgcctggcagtccctgtgcgagtggcgtgaggcccagattcgtctgcgtgacgtgccg
cgctcgcgcctgctggcggatgcccagctgttcgccatctgcgagcgtctgccggtcaat
cgtttcgaactggccaaggtcgaggggctccacccgccgcagatcaagcgcatcggcgac
agcgtgctggaaattctcaaggacgtggcgatgatcgatgacagccagttgccgcgcgtg
ccgccgtcgccgttggcgccggaatggaaggcgcgcatgaagcgcctcaagcgtgaggtc
aacgcggtcgccgaggcccaggacctcaagccggagattctcggcaagcgtcgcgacatg
gaagcgctggtgatcgccgactacgaaggtgagccgctgccgttgccgggtggctggcgc
ggcgcgctgctggccgagcgcctcgccaaggcgttccagccggaatga
DBGET
integrated database retrieval system
