Cobetia marina: BFX80_04145
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Entry
BFX80_04145 CDS
T04789
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cmai
Cobetia marina
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmai03016
]
BFX80_04145
Enzymes [BR:
cmai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BFX80_04145
Transfer RNA biogenesis [BR:
cmai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BFX80_04145
Prokaryotic type
BFX80_04145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AOM02824
LinkDB
All DBs
Position
1009565..1010626
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AA seq
353 aa
AA seq
DB search
MQRWPHAHGGPLGAGDFRHTPEDFRVTELMDFVPEGHGEHQWLWIEKRGLTTDELCRELA
GLCDVAPRDIGVAGLKDKQAITQQWVSVWLPGREAPEHLSEALAEKGARVLASVRHPRKL
KRGVHRGNRFALRVSGEAVAHPDFETRWQTLIRDGVPNYFGPQRFGHQGHNLGRARAVLI
RGWRKRDDRSGMLLSTARSFLFNEVLAARLKAGCWATALSGEVFALDGTGSRFVTDGSEA
VETLTRRLADGDIHPTGPLWGTGRGESHAQVAALEQVLASSWPQLCDGLEKAGVKAERRP
LRLMPANARLEWDITPAQADAEATAASAWLHFDLPRGSFATGLLRELIAHPLL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgctggccgcatgcccatgggggcccgctgggcgcaggtgacttccgacacacg
ccggaagactttcgcgtcacggaattgatggacttcgtgcccgaaggtcacggggagcac
cagtggctctggatcgagaagcgcggtctgaccactgacgagctgtgccgcgaactggca
ggtctttgtgacgtggcaccgcgtgacatcggcgtggcgggactcaaggacaagcaggcg
attacccagcagtgggtctcggtatggttgccggggcgtgaagcccctgagcatctgagt
gaggccttggccgagaagggggcccgcgtgctggccagcgtgcggcacccgcgcaagctc
aagcgtggcgtgcatcgcggcaatcgctttgcgctgcgagtgagcggcgaggccgtggcc
catccggatttcgagactcgctggcagacattgatacgcgatggggtgcccaactatttc
ggtccgcagcgtttcgggcaccaggggcataacctggggcgtgcacgcgccgtactgata
cgtggctggcgcaagcgtgatgatcgcagcggcatgctgctgtccaccgcgcgcagcttc
ctgttcaacgaagtgctggccgcgcgtctcaaggctggctgctgggcgacggcgttgagc
ggtgaggtgttcgcgctcgacgggacgggatcgcgcttcgtcaccgatggcagcgaagct
gtcgagacgctgacccggcgccttgccgacggggatatccaccccacgggcccgctgtgg
ggcaccggccgtggcgagtcccatgcgcaggtcgcggcgcttgagcaggtgctggcgtcc
agctggcctcagctctgtgacggcctcgagaaggctggcgtgaaggccgagcgtcggcca
ctgcgcctgatgcctgccaatgctcgcctggagtgggacatcacgccggcccaggccgat
gccgaggcgactgcggccagtgcgtggctgcatttcgatcttccgcgcggcagcttcgcc
accggcctgttgcgtgagctgattgcccacccgctgctgtag
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