Cobetia marina: BFX80_04260
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Entry
BFX80_04260 CDS
T04789
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cmai
Cobetia marina
Pathway
cmai00260
Glycine, serine and threonine metabolism
cmai00460
Cyanoamino acid metabolism
cmai00630
Glyoxylate and dicarboxylate metabolism
cmai00670
One carbon pool by folate
cmai00680
Methane metabolism
cmai01100
Metabolic pathways
cmai01110
Biosynthesis of secondary metabolites
cmai01120
Microbial metabolism in diverse environments
cmai01200
Carbon metabolism
cmai01230
Biosynthesis of amino acids
cmai01240
Biosynthesis of cofactors
cmai04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BFX80_04260 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BFX80_04260 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BFX80_04260 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BFX80_04260 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BFX80_04260 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BFX80_04260 (glyA)
Enzymes [BR:
cmai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BFX80_04260 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DUF3863
Motif
Other DBs
NCBI-ProteinID:
AOM00652
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Position
1035594..1036856
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AA seq
420 aa
AA seq
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MFTRDMQIAGFDDALLSAMDDEVVRQEAHIELIASENYASPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEFVDKVEQLAIDRACELFGATYANVQPHAGSQANSAVFQALVSPGDTILGMS
LDAGGHLTHGARPNFSGKHYNAVQYGLGENGLIDYAEVARLAREHKPKMIIAGFSAYSQI
IDWAEFRKIADEVGAYLLVDMAHVAGLVAAGVYPSPLPHAHVVTTTTHKTLRGPRGGLIL
SAEGNADIEKKLNSAVFPGGQGGPLMHVIAAKAICFKEAMDPSFKTYQQQVVKNAQAMAS
VFLERGFEVVSGGTEDHLFLLSLVKQGLTGKDADAALGRAHITVNKNAVPGDPQSPFVTS
GLRIGTPAVTTRGFKEQECLDLAGWICDILEAMVAGDSAAAEAEVQAKVSEVCARLPVYA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgttcacccgtgacatgcagattgccggttttgatgatgcgctcctgagcgccatggac
gacgaagtcgttcgccaggaagctcacatcgagctgatcgcctccgagaactacgccagc
ccccgtgtcatgcaggcgcaaggctcccagctgaccaacaagtacgcggaaggctacccg
ggcaagcgttactacggcggttgcgagttcgtcgacaaggtcgagcagctggccatcgat
cgcgcctgcgaactgttcggtgccacctacgccaacgttcagccgcacgccggttcccag
gccaacagtgccgtcttccaggcgctggtctcgccgggcgacaccattctgggcatgagc
ctggacgcgggtggtcacctgactcacggtgcacgtccgaacttctccggcaagcactac
aacgccgtgcagtacggtctgggcgagaacggcctgatcgactacgccgaagtcgcgcgt
ctggcgcgtgagcacaagccgaagatgatcatcgccggcttctccgcctactcccagatc
atcgactgggccgagttccgcaagatcgccgacgaagtcggtgcctacctgctggtcgac
atggcccacgtggccggtctggtcgccgccggtgtctacccgagcccgctgccccacgcc
cacgtcgtcaccaccaccacgcacaagaccctgcgcggtccgcgtggcggcctgatcctg
tctgccgaaggcaatgccgacatcgagaagaagctgaactccgccgtcttcccgggtggc
cagggtggtccgctgatgcacgtcatcgcggccaaggcgatctgcttcaaggaagcgatg
gatccgtccttcaagacctaccagcagcaggtcgtcaagaacgcccaggccatggcgtcc
gtgttcctggagcgtggcttcgaagtcgtctccggcggcaccgaggatcacctgttcctg
ctgtcactggtcaagcagggcctgaccggcaaggacgctgatgcggcactgggccgtgcc
cacatcaccgtcaacaagaatgccgtgccgggtgacccgcagtcgccgttcgtcacctcc
ggtctgcgtatcggcaccccggccgtcaccacgcgcggcttcaaggagcaggagtgtctg
gatctggcgggctggatctgcgacatcctcgaggcgatggtcgctggcgattccgccgct
gccgaagccgaggtacaggccaaggtctccgaggtctgtgcacgtctgccggtctacgcc
tga
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