Cobetia marina: BFX80_05310
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Entry
BFX80_05310 CDS
T04789
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cmai
Cobetia marina
Pathway
cmai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BFX80_05310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmai03400
]
BFX80_05310
Enzymes [BR:
cmai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BFX80_05310
DNA repair and recombination proteins [BR:
cmai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BFX80_05310
Prokaryotic type
BFX80_05310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AOM00816
LinkDB
All DBs
Position
1273452..1274165
Genome browser
AA seq
237 aa
AA seq
DB search
MPLETATSGSSQVLPADWQAHLGQEFHAEYMQRLKAFLRVEKDAGKVIYPHSQDWFRAFW
LTPLSNVKVVILGQDPYHGPDQAHGLCFSVRPGVRPPPSLKNIYKELAVDVGVEPVDHGF
LESWAEQGVLLLNSVLTVEQGKAASHQKQGWEQFTDRAIDVINQHCEGVVFLLWGSHAQK
KAGAVDRQKHLVLHAPHPSPLAAHRGFFGSRHFSQANAWLEARGDVPIDWQLPLLDT
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgccgttggagactgccacctccggtagctcccaggtgctgcctgccgactggcaggcg
catctcgggcaggaattccatgccgagtacatgcagcggctcaaggccttcctgcgcgtc
gagaaagatgccggcaaggtgatctacccgcactcgcaggactggtttcgcgccttctgg
ctgaccccgctgagcaacgtcaaggtcgtgatcctggggcaggacccctatcacgggccg
gaccaggcacatggtctgtgcttctcggtacgccccggcgtgcgcccgccgccctcactg
aagaacatctacaaggaactggctgtcgatgtcggggtcgaacccgtggatcacggcttc
ctcgaaagctgggcggagcaaggggtgttgctgctcaatagcgtgctgacggtcgagcag
ggcaaggccgcctcgcatcagaagcaaggttgggagcagttcaccgaccgcgccatcgac
gtgatcaaccagcactgcgagggtgtcgtcttcctgctctggggcagtcatgcccagaag
aaggcgggggccgtggatcgccagaagcatctggtactccacgctccgcatccgtcgcct
ctcgcagcgcaccgcggattcttcggttctcgtcacttctcacaggccaatgcctggctg
gaggcacgtggcgatgtgccgatagattggcagctgccactgcttgatacctga
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