Cobetia marina: BFX80_05355
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Entry
BFX80_05355 CDS
T04789
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
cmai
Cobetia marina
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
Mg_chelatase
AAA
HTH_28
HTH_29
HTH_30
LZ_Tnp_IS481
HTH_23
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AOM00825
LinkDB
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Position
complement(1283822..1285354)
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AA seq
510 aa
AA seq
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MTVHATSPAREARRATHDQALPTASVLIVDDEPGMRRYLEKALASRFAMIEAVESVEQAE
SLRSRLHFDLILLDIRLPGRDGLEWEEALSPSSVSDVIFMTAYADLDTAVRALRAGASDF
IIKPFRLEQLHAAIDRCLERRQLARENFLLRRDNARHQGEEASLQGETPGMQELAQIIAR
VAPAPSPVLILGESGTGKELAARDLHRLSGRRGAFVPVNCGAISPELLESELFGHLKGAF
TGAHRGRDGLFSFADGGTLFLDEIGEMPLTMQSRLLRVLETRRVRPVGGEQEQAVDVRIV
AATHRTLETEVAAGRFREDLYYRLNVLSLRLPALRDRPADIPALALHFSRQLSRELGLPE
VPWDHTDLARLCRYAWPGNVRELKNVIERALLLGRLPGDALPASGTSLTSGHAAMPGASD
APGDAAAPHAGGEADSEASHGYPLEWSLDRVEQAHLRAVLEHHANNKSAAARQLGISRKT
LDRKLTHWRAEAESPMPDRDSSHRSADDPA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtccacgccacctctcccgcacgggaggcgcgtcgcgccacgcacgaccaggct
ttgccgaccgcatcggtcctgatcgtcgatgacgagccgggcatgcggcgttacctggaa
aaggcgctggcatcccgcttcgcgatgatcgaagccgtcgaaagcgtcgagcaggccgaa
tcgctgcgctcgcgcctgcattttgatctcatcctgctcgacatccgcctgccgggacgt
gatggccttgagtgggaggaggccctgtcaccgtcatcggtcagcgacgtcatcttcatg
acggcctatgccgatctcgataccgccgtacgtgccctgcgcgcaggtgccagtgatttc
atcatcaagccgttccgcctcgaacagctgcacgccgcgatagaccgctgcctcgaacgc
cgccaactggcacgcgagaacttcctgctgcgtcgcgacaatgcacgccaccagggtgag
gaggccagcctgcagggcgagacccccggcatgcaggaactcgcgcagatcatcgcgcgc
gtcgcgccggccccctctcccgtgctgatactcggggaatccggcaccggcaaggaactg
gcggcacgcgacctgcaccgtctctccggacggcgcggtgccttcgtaccggtcaactgt
ggcgccatcagtccggaacttctcgagagcgagcttttcggtcacctcaagggggccttc
accggcgcccaccgcggacgtgatgggctgttcagcttcgccgatggcggcaccctgttt
ctggatgaaatcggcgagatgccgctgaccatgcagtccaggctgttgcgggtactggaa
acccgacgcgtgcgcccagtgggcggtgagcaagagcaggccgtcgatgtgcgcatcgtg
gccgccacccatcgcacgctcgagacggaggtcgcggcgggtcgctttcgagaagacctc
tactaccgcttgaacgtgctcagcttgcggctgccggcactgcgggatcgccccgcggac
attcctgccctggccctgcatttctctcgacagctgtcgcgcgaactgggactgcccgag
gtcccctgggatcacaccgaccttgcacgcctgtgtcgctatgcctggcccggcaacgtg
cgtgaattgaagaatgtcatcgagcgcgcgctgctgctgggccgcctgcccggcgatgcc
ctcccggcctccggcacctctctcacgtctggccatgccgcgatgcccggcgcctcggat
gcaccaggcgacgctgccgccccccatgcggggggggaggccgacagcgaggcttcacac
ggctatccgctggagtggtcgctggatcgtgtggagcaagcgcacctgcgtgcagtactg
gagcatcacgccaacaacaagtccgctgccgcgcgtcagctgggcatctcgcgcaagacg
ctggatcgcaagctgacccactggcgcgccgaggccgagagccccatgcctgaccgcgac
tcgtctcaccgctcggctgatgaccctgcatga
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