Cobetia marina: BFX80_07780
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Entry
BFX80_07780 CDS
T04789
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cmai
Cobetia marina
Pathway
cmai02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BFX80_07780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmai02000
]
BFX80_07780
Transporters [BR:
cmai02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BFX80_07780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AOM02946
LinkDB
All DBs
Position
complement(1884822..1885853)
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AA seq
343 aa
AA seq
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MATLLSSASVSAAEVPEALLKAAQAEGRVDSVGMPDSWANWKDTWADLESKYSIAHSDTD
MSSAEEVAKFKAEGENATADIGDVGFAFGPIAVKQGVTQAYKPTTWDEIPDWAKDEDGEW
MLGYTGTISLMINKTLVSEDQRPASFADLANGDYKVSVGAVGKASQANNAILAAAFANGG
SESDLTPGLEVFAELARQGRLSLAEPSIANLEKGEVEVALLWDFNALNYRDQINRDTFEV
VIPSDASVTSGYATIINKHAAHPNAAKLAREYILSDAGQLNLAAGYARPIRAEHLTLPED
IAAKLLPNEQYANARPVQDFAGWEASARQLPRQWQSQVLIHQQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctgctgagcagcgcctccgtcagtgccgctgaagtgccggaagcactgctc
aaggccgcccaggcagaaggccgcgtcgacagcgtcggcatgccggacagctgggccaac
tggaaggacacctgggcagacctcgagtcgaagtattccatcgcgcacagcgataccgac
atgagctccgccgaggaagtcgccaagttcaaggccgaaggcgagaacgccacggcagat
atcggtgacgtgggcttcgccttcggccccatcgcggtcaagcagggcgtgactcaagcc
tacaagccgaccacctgggacgagatccccgactgggccaaggatgaagatggcgaatgg
atgctgggctacaccggcaccatctccctgatgatcaacaagacactcgtcagtgaagat
cagcgccccgcttccttcgcggatctcgccaatggcgattacaaggtctccgtcggcgcg
gtcggcaaggcgtcccaggccaacaacgccatcctggccgcagccttcgccaatggcggc
agcgagtcagacctgacgccgggtctggaagtgttcgccgaactggcccgccagggacgc
ctgtcactggccgagccgagcatcgccaacctggagaagggcgaggtggaggtcgcactg
ctgtgggacttcaacgcgctcaactatcgcgatcagatcaaccgcgacaccttcgaggtg
gtcatcccctcggatgcctccgtcacctcgggctacgccaccatcatcaacaagcatgcc
gctcacccgaacgccgccaagctggcgcgtgagtacatcctgtcagatgccggccagctg
aacctggcggcaggttacgcccgcccgatccgtgccgagcacctgaccctgccggaagac
atcgccgccaagctgctgcccaacgagcagtacgccaatgcccgcccggtacaggacttc
gccggctgggaagccagtgcccgacagctgccgcgtcagtggcagtcccaggtactgatc
caccagcagtga
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