Cobetia marina: BFX80_08770
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Entry
BFX80_08770 CDS
T04789
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
cmai
Cobetia marina
Pathway
cmai02020
Two-component system
cmai02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFX80_08770
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BFX80_08770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmai03021
]
BFX80_08770
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cmai02035
]
BFX80_08770
Transcription machinery [BR:
cmai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFX80_08770
Bacterial motility proteins [BR:
cmai02035
]
Flagellar system
Flagellar assembly proteins
Stator
BFX80_08770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
LexA_DNA_bind
MarR
PhyR_sigma-like
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AOM01379
LinkDB
All DBs
Position
2125943..2126689
Genome browser
AA seq
248 aa
AA seq
DB search
MYTANGRMAQQDIYTEYQPLVRRIALQLQVRLPASVDLEDLIQAGMLGLCECVGRYEQGH
GASFATYASQRIRGAMLDELRSRDWLPRSVRRAGRELESVIQQLEQSLGYPPEETQIASA
MGLELEDYRRLLLDTNNGMVMSLDEMLDEDGAAPGGISTPYVEPFALPHEALEEADTRRA
LTEAIGRLPEREKLLMALYYQENLNLKEIGAVLDVTESRVSQLHSQAVRRLQGVLAPHLV
ARAGKRRR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtataccgccaatgggcgcatggcccagcaggatatctacaccgaatatcagccgctg
gtgcgccgcatcgcgctgcagttgcaggtgcgcttgccagcgagtgtcgatctcgaggat
ctgattcaggctggcatgttggggctgtgtgaatgcgtgggccgctatgagcagggccac
ggcgccagctttgccacctatgccagtcagcgcatccggggtgcgatgctcgatgagctg
cgctcgcgagactggttgccacgcagtgtgcgtcgggccgggcgcgagcttgagagcgtg
atccagcagctggagcagagcctgggttatccgcccgaggagacccagatcgcctctgcc
atggggcttgagctagaagattaccgacgcctgctgctggataccaacaacggcatggtg
atgtcgctggacgagatgctggatgaggatggcgccgcaccgggcggaatctccactccc
tacgtggaacccttcgcattgccccacgaggcgctggaggaggccgatactcgccgagca
ctcaccgaggccatcggacggcttccggagcgcgagaagctgttgatggcgctttattat
caggagaatctcaatctcaaggagattggcgcggtgctcgatgtcaccgagtcgcgggtt
tcccagttgcactcccaggccgtgcgccgtctgcagggtgtgttggcgccgcatctggtg
gcgcgggcgggcaagcgtcgtcgctga
DBGET
integrated database retrieval system
