Cobetia marina: BFX80_12075
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Entry
BFX80_12075 CDS
T04789
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cmai
Cobetia marina
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmai03016
]
BFX80_12075
Enzymes [BR:
cmai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BFX80_12075
Transfer RNA biogenesis [BR:
cmai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BFX80_12075
Prokaryotic type
BFX80_12075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AOM01886
LinkDB
All DBs
Position
complement(2950216..2951325)
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AA seq
369 aa
AA seq
DB search
MPFFTPLDDNERRPGRIALGVEYDGSRYCGWQRLSHAPSVQETLEKALSKVASTPITVHC
SGRTDSGVHAVRQVVHFDTPVGRSRKAWRMGGNVNLPPDIGIHWAVPVPDDFHARFSAIA
RRYRYMIINQPFRPVMERHNATWCREPLNVADMQAAAAHLVGELDFSAFRAAGCQSRSPR
RHVHFIEVSRHGQLVMIDIQANAFLHHMVRNIAGTLMAIGRGEKPVEWIVELMRGGDRTR
SSATAAATGLHFVDVIYPPRYELPREPLGPGLVAHLGEWTGERPLPDCPMVRSRLARAEA
EGAEEARAAGKLSEKEAIRLASVAREAERLSREHEQAIPAAGAGSPVAGAPAAGSSAAGS
PVAQNESSR
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcccttttttacaccgcttgatgataatgaaagacgcccggggcgcatcgctctgggc
gtcgagtatgatggcagccgctattgcggttggcagcgcctcagccacgcaccttccgtg
caggaaacgcttgaaaaggcgctttccaaggtggcttccactcccatcaccgtccactgc
agcgggcgcaccgattcaggtgtgcacgccgtgcgtcaggtcgtgcacttcgataccccc
gtgggccgcagccgcaaggcatggcgcatgggcggcaacgtcaatcttcccccggatatc
ggtatccattgggcggtccccgttcccgatgacttccatgcccgattcagcgccatcgcg
cgtcgttatcgctacatgatcatcaatcagccttttaggccagtgatggagcgacacaac
gccacctggtgtcgtgaacccctgaatgtcgccgacatgcaggcggcggccgcccatctg
gtaggggagctggacttctcggccttccgtgcggcaggttgtcagtcgcgctcgccacga
cgccacgtgcatttcatcgaggtgagtcgtcacggccagctggtcatgatcgacatccag
gcgaatgccttcctgcaccacatggtgcgcaatatcgccggtaccttgatggccatcggg
cgtggcgagaagcctgtcgagtggatcgtcgagctgatgcgcgggggagatcgcacgcgc
tcgagtgccacggcagcagccacgggacttcacttcgtcgacgtcatctatccgccgcgc
tatgagctgcccagggagccgctcgggcctggtctggtggcccatctcggggagtggacg
ggagagcgtcccttgccggattgcccgatggtacgctcacgcctggcccgtgccgaagcc
gagggtgccgaagaggctcgggcggcaggcaagctcagtgaaaaggaagccattcggctg
gcaagcgttgcccgtgaggccgagcgtctcagtcgggaacatgaacaagcgattcctgcg
gcaggcgcagggtcgcctgtcgcgggggcgcccgccgcaggatcgtccgccgcaggatcg
cctgtcgcacagaatgaatcctcacgttga
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