Cobetia marina: BFX80_14750
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Entry
BFX80_14750 CDS
T04789
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cmai
Cobetia marina
Pathway
cmai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BFX80_14750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmai03400
]
BFX80_14750
Enzymes [BR:
cmai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BFX80_14750
DNA repair and recombination proteins [BR:
cmai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BFX80_14750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
tRNA_int_end_N3
Motif
Other DBs
NCBI-ProteinID:
AOM02297
LinkDB
All DBs
Position
complement(3585284..3589336)
Genome browser
AA seq
1350 aa
AA seq
DB search
MFTVLHANHLEDLRDLALKVIKAAPQPPLVPETFLVQSNGMAQWLRLSLAEADGIAASVD
FPLPSSFVWRAYRGVLGGVLGDEIPELSPFDKGPLAWRLLRLLPGLLADESQAECYAPLR
DYLCRDERGQLIEAVGEGALPALPEGPEAERQQWQLACQLADLFDQYLNYRPEWVRSWES
GLEDDNFRDAFARQQAAGELPANLLPDNLPASQKWQPALWRAVLADAPPSSRQHHRAALH
GRFVAAARALESLPSSRRHPLPPRLFVFGISALPGQTLDALHALSGVMDIYLMITNPCRH
YWGDIVSDREAVRRSMRADSLRMDSERVARQRARHPEAPALTGLAEEELHLKANPLLAGL
GAQGRDFIVNLYEFESALSGRDSGFDLELDVFVPRISEDTPPEQAPLLHQIQDEILELVH
PGERALAEGSPRRLEAQDDSISLVSAHSALREVEILHDRLLAAFERAHEAARQGEGEPLR
PRDILVMVPDIDRYAPYIEAVFGQLPPGNPRHIPFTIADRVASQANPLLGLVLMLLELPE
RRLGVSEVLDALDVAAFRRRFAIEEGELERLRRWLADSGVRWGLSGEHREQLGFMPLDEN
SWRFGLERMLLGYATGSPAAGSQAAGSPIQGEQSADLMDGLMDGLVDMNGLSFDGVVPFD
EVAGLEAELAGKVGELIESLDRWRRWLDTSRTPADWATTLQRLWEESLSPDSAEEFDILA
RLQAALSRLDKGWQQAGFEGCLSLKVVREALRGELDSGGLAQRFLAGRVNFATLMPMRAI
PFREVHLLGMNDGDYPRVRMPQDFDLMASRPQPGDRSRRDDDRYLFLEALLAARDRLSIS
WVGRDQRDNGERPPSVLVGELLDYIELGWTPETHAEAPGVSREVALRERLITEHPLQPFS
RRYFHASQATAGDLFSYDASWSSLYRAAGQAPTSEASPANQREASQASAAGAAALKQLVE
QAPESHLRLGADSLARFLRRPWQLGLDRVGVRFRDAEVPDEDNEPFAPDGLENFTLTREL
LDAALTGQSLPLAAERLRRAGRLPALGFADALIEPRLKRLDQQLASWRDQLSDATSLPPR
TLEVPLIMQDEDGRPLRVTLTTRLISRRQLRDDAEGESCLLATLEATHFGTLKPGKEGRY
KKLGKPHRLLAGYLDWLMANARPGLGEVAGDQGTRREGYQWLAVFEDRWLLFPALRIEQA
EAALRHLVKAYAQGWQAPLAAALELATTLWEVVGEEDRSALFGALKAQAADGTPTLETAL
AAIHKPWLADSLSRAMETRFTEDIFKGPQALRRQEGALGELWPEFDAFARAGGVLNSVQL
YQPLIESMIGVRQGILGERAVELATGKAQP
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccgttcttcacgccaatcacctcgaggatctgcgcgatctggcgctcaaggtg
atcaaggccgctccccagcctccgctggtgccggaaacctttctcgtccagtccaacggc
atggcccagtggctgaggttgtcattggccgaggccgatggcatcgctgcctcggtcgat
tttccactgccctcaagcttcgtgtggcgtgcctatcgcggggtcctgggtggcgtgctg
ggcgacgagattccggagctgtcacccttcgacaagggtccgcttgcctggcgtctgctg
cgccttttgccgggcctgctggccgatgaatcccaggcggaatgctatgcgccgctcagg
gattacctgtgtcgcgatgagcgtggccagctgatcgaggcagtcggtgagggtgccctg
cctgcactgcccgaggggccggaggcagagcgtcagcagtggcagctggcctgccagctg
gcggatctcttcgaccagtacctcaactatcgccccgagtgggtgcgcagctgggagagc
gggctggaggatgacaacttccgcgatgccttcgcgcgtcagcaggccgcaggcgagctg
cccgccaatctgctgccggacaacctgcccgccagccagaaatggcagccggccctgtgg
cgcgcggtactggcggatgcgccgcccagcagccggcaacatcaccgtgccgccctgcat
ggtcgcttcgtcgcggctgcgcgcgcgctggaatcgctgccctcatcacgccgccacccg
ttgccgccacgcctgttcgtgttcggcatctcggcactgccggggcagacgctggatgcg
ctgcatgcgctgtccggggtgatggacatctacctgatgatcaccaatccctgccgtcat
tactggggcgatatcgtctccgaccgcgaagccgtgcggcgcagtatgagagccgacagt
ctgcgcatggacagcgagcgcgtcgcgcgacagcgtgcccgtcaccccgaggcaccggcg
ctgaccgggctggcggaggaggagctgcacctcaaggccaatccgctgctggccgggctg
ggtgcccaggggcgtgacttcatcgtcaatctgtatgaattcgagagcgcgctgtccggc
cgcgacagcggtttcgatctcgaactggacgtcttcgtgccgcgcatcagcgaggatacg
ccccccgagcaggcaccgctgctgcatcagatccaggatgagattctcgagctggtgcat
cccggcgagcgcgccctggccgagggaagtcctcgcaggctggaggcgcaagatgattcc
atcagtctggtcagcgcccactcggcgctgcgcgaagtcgagattctgcatgaccgcctg
ctggcggccttcgaacgtgcccacgaggcggcccggcagggggagggcgaaccgctgcgg
ccgcgcgacatcctggtgatggtgccggacatcgaccgatatgccccctatatcgaggcg
gtcttcggtcagctgccgccgggcaatccgcgccatattcccttcaccatcgccgaccgg
gtggccagtcaggccaatccgctgctcggactggtcttgatgctgctggagctgccggag
cgccgcctcggcgtcagcgaggtgctggatgcgctggatgtcgccgccttccggcgtcgt
ttcgccatcgaggagggcgaacttgagcgcctgcggcgctggctggccgacagcggcgtg
cgctgggggctctccggtgagcaccgtgagcagctcggcttcatgcccctcgacgagaac
agctggcgcttcgggctcgagcgcatgctgctgggctacgccaccggctccccggcggca
ggctcccaggcggccggctccccaatacaaggtgagcagagcgccgacctgatggacggc
ctgatggacggccttgtcgacatgaacggcctgagcttcgatggcgtggtgcccttcgat
gaagtggccggtctcgaggccgaactggcaggcaaggtcggcgagctgatcgagagcctg
gatcgctggcgccgctggctggacacctcgcgtacgccagcggactgggcgactacgctg
cagcgattgtgggaggagagcctcagcccggacagtgccgaggaattcgacattctggcg
cgtctgcaggcggcgctttcccgcctcgacaagggctggcagcaggccggtttcgagggc
tgtctgtcgctcaaggtggtgcgcgaggcgctgcgtggcgagctggacagtggtggtctc
gcccagcgcttccttgccggtcgggtcaacttcgccaccctgatgccgatgcgtgcgatt
cccttccgcgaagtgcacctgctgggcatgaacgatggtgactacccgcgcgtgcgcatg
ccgcaggatttcgatctgatggccagccgccctcaaccgggagaccgctcacggcgtgac
gatgatcgctacctgttcctggaggcgctgctggcggcgcgggatcgcctgtcgatctcg
tgggtcgggcgtgaccagcgcgacaacggcgaacggccgccctcggtactggtcggggaa
ctgcttgattacatcgagctgggctggacccccgagacgcatgccgaggcaccgggtgtc
tctcgcgaagttgccctgcgcgagcgtctgatcaccgagcatccattgcagccgttctcg
cggcgctatttccatgcctcccaggcgacggctggcgatctgttcagctatgacgccagc
tggtcgagcctgtatcgcgcggcgggtcaggctccaacctcagaggcctccccggcgaat
caacgcgaagccagtcaggcaagcgcggcgggggcggccgccttgaagcagctggtggag
caggcaccggagtcccatctgcgtctcggcgcggactcgctggcgcgcttcctgcgtcgt
ccctggcagctggggctggaccgcgtcggagtgcgcttccgcgatgccgaggtgccggat
gaggacaacgaacccttcgcccccgacgggctggagaacttcaccctgacccgcgagctg
ctggacgccgcgctcaccggacaatccttgccgctggccgccgaacgtctgcgccgggcc
gggcgcctgccggcgctgggctttgccgatgcgctgatcgaaccgcgcctcaagcgtctc
gatcagcagctggccagctggcgcgatcagctcagcgatgccacctcgctgccgccgcgc
accctcgaggtaccgctgatcatgcaggatgaggacggcaggcccttgcgggtgacgctc
accacgcgtctgatcagccgtcggcaactgcgcgatgacgccgagggcgagagctgcctg
ctggccacgttggaggcgacccacttcggcaccctcaagcccggcaaggagggccgctac
aagaagctcggcaagccgcatcgtctgctggccggctatctcgactggctgatggccaac
gcgcgccccggcctcggggaggtggcgggtgatcagggcacgcgccgtgaaggctatcag
tggctggcggtgttcgaggaccgctggctgctgttccccgcgctgcgtatcgagcaggcc
gaagccgcgctgcgccatctcgtcaaggcgtatgcccagggctggcaggcgccgctggcc
gccgcgctggaactggcgaccacgctctgggaggtagtgggcgaggaggatcgcagtgcc
ttgttcggcgcactcaaggcgcaggccgctgacggcacgccaacgcttgagacggcgctg
gccgccatccacaagccctggcttgccgacagcctgtcgcgcgccatggaaacccgcttc
acggaagacatcttcaagggcccccaggcactcaggcgacaggaaggtgcgctgggcgag
ctgtggccggagtttgacgccttcgcccgtgcgggcggcgtgctcaacagcgtgcagctc
tatcagccgttgatcgagagcatgatcggcgtgcgtcagggcattctcggcgagcgcgcg
gtggagcttgccaccgggaaggcgcaaccatga
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