Cobetia marina: BFX80_16110
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Entry
BFX80_16110 CDS
T04789
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cmai
Cobetia marina
Pathway
cmai03030
DNA replication
cmai03410
Base excision repair
cmai03420
Nucleotide excision repair
cmai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFX80_16110
03410 Base excision repair
BFX80_16110
03420 Nucleotide excision repair
BFX80_16110
03440 Homologous recombination
BFX80_16110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmai03032
]
BFX80_16110
03400 DNA repair and recombination proteins [BR:
cmai03400
]
BFX80_16110
Enzymes [BR:
cmai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFX80_16110
DNA replication proteins [BR:
cmai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BFX80_16110
DNA repair and recombination proteins [BR:
cmai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BFX80_16110
NER (nucleotide excision repair)
GGR (global genome repair) factors
BFX80_16110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AOM02504
LinkDB
All DBs
Position
complement(3907804..3910692)
Genome browser
AA seq
962 aa
AA seq
DB search
MAATPIVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVINMLKSLIRQYPDSPMAVVFD
AKGKTFRDDMYPEYKAQRPPMPDDLRLQVEPLHACVRALGLPLLCVEGVEADDVIGTLAR
LATEAGRDAVISTGDKDMAQLVNEHITLVNTMKNETLDVDGVTEKFGIPPNLIIDFLALM
GDKVDNIPGVPGVGEKTALGLLQGMGGGLDTIYGDLDRIKTLSFRGAKTLAKKMEAHRED
AYLSYRLATIKLDCELEHGLDDLAIAAPDTAALVELYKEMEFRAWLKELLEGGDMAATPH
ADEKDSGVAGGDLFGDSIAPVAEKASGKGKTAAAPTPELDGAGDEDEMPEALPPREERNY
RAITEQAELDAWLERVRSSTSLCFDLETTSLNYMEAEIVGIGMALEVGEAVYIPVAHSYL
DAPAQLDRKAVLEALTPILADGAITKIGQNLKYDIEVLARYDIAVAGPLADTMLMSYVLN
STATRHDMDSLALKYLGESTISFTDIAGKGAKQLTFDQIALEEAMPYACEDVDITLRLAA
LLMPRIEKLGRLGEVLRDYEYPLIPVLARIERNGVAIDPERLHAQTRELTEQIHDIEKQA
FELAGREFNLSSPKQLGEILFEEQKLPVKKKTPKGAPSTAEAVLEELALDYPLPKLIMRH
RGMTKLKSTYTDKLPQLVNPTTRRLHTSYHQAVTATGRLSSSDPNLQNIPVRSEEGRRIR
QAFIARLGYRIVAADYSQIELRIMAHLSGDKGLLSAFADNRDVHAATAAEVFGTEESRVS
SDQRRSAKAINFGLIYGMSAWGLSRQLDIDPGQAKTYIERYFERYPGVATYMEDTRHLAA
EQGYVETIFGRRLYLPEIGSRNHARRSAAERTAINAPMQGSAADIIKRAMIDVDAWLAGN
DGDKAYDAMMVMQVHDELVFEVAEAQVEDFMKDVAQRMQNAASLDVPLLVEVEQGDNWEE
AH
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggccgccacgccgatcgttctcgtcgatggatcttcctacctctatcgtgcctttcat
gccctgccgccgctgaccacctccaagggcctgcccaccggcgcggtgaagggcgtgatc
aacatgctcaagagcctgatccgccagtatccggacagccccatggcggtggtgttcgac
gccaagggcaagaccttccgtgatgacatgtaccccgagtacaaggcccagcgtccgccg
atgcccgatgacctgcgcctgcaggtcgagccgctgcatgcctgcgtacgcgcgctgggt
ctaccgctattgtgcgtggaaggtgtcgaggccgatgacgtcatcggaactcttgcgcga
ctggccaccgaggccgggcgtgacgccgtcatctccaccggcgacaaggacatggctcag
ctggtgaatgagcacatcacgctggtcaacaccatgaagaacgagacgctggacgtggac
ggcgtcaccgagaagttcggcattccgcccaacctgatcatcgacttcctcgcgttgatg
ggcgacaaggtcgacaacattcccggcgtgccgggtgtgggcgagaagaccgcgctgggc
ctgctgcagggcatgggcggcggtctcgacaccatctacggtgacctcgatcgcatcaag
acgctcagcttccgcggcgccaagacgctggccaagaagatggaagcgcaccgcgaggat
gcctatctctcctatcgtctcgccaccatcaagctggactgcgagctggagcatggcctg
gatgacctcgcgatcgccgcgccggataccgccgcgctggtcgagctctacaaggagatg
gagttccgcgcctggctgaaggagctgctggaaggcggtgacatggccgccaccccgcac
gccgatgagaaggacagcggtgtcgccggcggtgatctgttcggcgacagcatcgcgccc
gtcgcggagaaggcctccggcaagggcaagaccgccgctgcaccgacgcctgagctggat
ggggcgggtgacgaggacgagatgcccgaggcgctgccgccgcgtgaggagcgcaactac
cgcgccatcaccgagcaggccgagctggacgcgtggctggagcgtgtgcgcagcagcacc
tcgctgtgcttcgacctcgagaccaccagcctcaactacatggaagccgagatcgtcggc
atcggcatggcgctggaagtcggcgaggccgtctacattcccgtcgcccacagctatctg
gatgcccccgcgcagctggaccgcaaggccgtgctggaggcgctgacgccgattctggcc
gatggtgccatcaccaagatcggccagaacctcaagtacgacatcgaggtgctggcgcgc
tatgacatcgcggtggccggtccgctggccgacaccatgctgatgtcctacgtgctcaac
tccaccgcgacccgtcacgacatggactcgctggcgctcaagtacctgggcgagagcacc
atcagcttcaccgacattgccggcaagggcgccaagcagctgacgtttgaccagatcgcg
ctggaagaggcgatgccctacgcctgcgaggatgtcgacatcaccctgcgcctcgccgcg
ctgctgatgccgcgcatcgagaaactggggcgtctaggcgaggtgctgcgtgattacgaa
tacccgttgattccggtgctggcgcgcatcgagcgcaacggcgtcgcgatcgaccccgag
cgcctgcacgcccagacccgtgagctgaccgagcagatccacgacatcgagaagcaggcc
tttgagctggcgggccgcgagttcaatctctcctcgcccaagcagctgggcgagatcctc
ttcgaggagcagaagctgccggtcaagaagaagacccccaagggcgcgccgtccaccgcc
gaagccgtgctcgaggagctggcgctggactacccgctgcccaagctgatcatgcgccat
cgcggcatgaccaagctcaagagcacctacaccgacaagctgccgcagctggtcaacccg
accacgcgtcgcctgcacaccagctaccatcaggccgtcaccgcgacgggtcgtctgtcg
tcgtctgatccgaacctgcagaacatcccggtgcgcagtgaagagggccgtcgcattcgt
caggccttcatcgcacgcctcggctatcgcatcgtcgcggcggattactcgcagatcgag
ctgcgcatcatggcgcacctctccggtgacaaggggctgctctcggccttcgccgacaac
cgtgacgtgcacgccgccaccgccgcggaagtcttcggtaccgaggaatcacgtgtcagc
agtgaccagcgtcgcagcgccaaggccatcaacttcgggctgatctacggcatgtccgcc
tggggcctctcgcgtcagctggatatcgaccctggccaggccaagacctacatcgagcgc
tacttcgagcgctatccgggcgtcgccacctacatggaagacactcgccacctcgccgcc
gagcagggctatgtcgagaccatcttcggccgtcgtctctacctgccggaaatcggctcg
cgcaatcacgcgcgtcgcagtgctgccgaacgcaccgccatcaacgccccgatgcaaggc
agcgccgccgacatcatcaagcgcgccatgatcgacgtggacgcctggctggcgggcaat
gacggtgacaaggcgtatgacgccatgatggtcatgcaggtacacgatgaacttgtcttc
gaagtcgccgaagcgcaggtcgaagacttcatgaaagacgtcgcgcagcgcatgcagaac
gccgcctctctcgatgtcccgctgctcgtcgaagtcgagcaaggcgacaactgggaagaa
gcacattaa
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