Cobetia marina: BFX80_16385
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Entry
BFX80_16385 CDS
T04789
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cmai
Cobetia marina
Pathway
cmai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BFX80_16385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmai03019
]
BFX80_16385
Enzymes [BR:
cmai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BFX80_16385
Messenger RNA biogenesis [BR:
cmai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BFX80_16385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AOM02541
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All DBs
Position
3967117..3968517
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AA seq
466 aa
AA seq
DB search
MFKGFTRFLQRPGDRLKTLFNATDAPEATLPSLRVIPRDEHPVSRRQLSENALKVLYRLQ
SGGYQAYLVGGCIRDALLGERPKDFDVATNATPEQVRELFRNARIIGRRFRIVHVRFGRE
VIEVTTFRGKPADSTPSQHTQQSEDGMLLRDNVWGSIEEDALRRDFTINALYYDVSDFTI
HDWAHGVRDIEARMIRLIGDPETRYREDPVRMLRAVRFAGKLDFDIEEATAEPMYELAPL
LLQIPPARMFEEVLKLFMSGYALETFHLLREFGLFQMLFPETEESFAHYHWSMPLIEKAL
ASTDDRIRDDKPVTPAFLYAALLWPGVKARTDQLVASGMPDIPAAHQAAQQAIARQLNHT
SIPKRFSIPMREIWDMQAKLPRRRGKRAFQTREHPRFRAAYDFLLLREFAGEVKPGLGKW
WTDFQEVDSRAQVAMIEGVSDEGPAGSKPAGTKRRGKRRRNGRGQG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaggatttacccgctttctccaacgccccggtgaccgcttgaagacgcttttc
aatgcaactgacgcgcccgaggccaccctgcccagcctgcgtgtgataccgcgggatgag
catcccgtgtcccgccgccagctcagcgaaaacgcgctgaaggtgctctatcgcctgcag
agcggcggctatcaggcctatctggtcggtggctgcatccgcgatgccctgctcggcgag
cgcccgaaggacttcgacgtggcgaccaacgccacgccggaacaggtccgcgagctgttc
cgcaacgcacgtatcattggccgacgcttccgcatcgtgcatgtacgcttcggccgtgag
gtgatcgaggtcaccaccttccgtggcaagcctgccgacagcacgccgagccagcatacc
cagcagtcggaagatggcatgctgctgcgcgacaacgtctggggctccatcgaggaggac
gcgctgcgccgcgacttcacgatcaacgccctctactacgacgtgtccgacttcacgatc
cacgactgggcacatggcgtgcgtgacatcgaagcgcgcatgatccgcctgatcggtgac
ccggaaacgcgctatcgcgaagatccggtccgcatgctgcgggcggtccgcttcgccggc
aagctggacttcgacatcgaggaagccaccgccgaaccgatgtacgagctggcaccgctg
ctgctgcagattccgccggcacgcatgttcgaggaagtgctgaagctgttcatgtccggc
tacgctctggaaacgttccacctgttgcgtgagttcggtctgttccagatgctgttcccg
gaaacggaagagagcttcgcgcactatcactggtccatgccgctgatcgagaaggcgctg
gcgagcacggatgatcgtatccgtgacgacaaaccggtcacgccggccttcctctacgct
gcgctgctgtggcctggcgtcaaggcacgcaccgaccagctggtcgccagtggcatgccg
gacatcccggccgcccaccaggcggctcagcaggcgatcgcccgtcagctcaaccacacc
tcgattccgaagcgcttcagcatcccgatgcgcgagatctgggacatgcaggccaagctg
ccgcgtcgccgtggcaagcgcgccttccagacccgcgagcatccacgcttccgcgccgcc
tatgacttcctgctgctgcgggaattcgccggcgaagtgaagccgggactgggcaagtgg
tggaccgacttccaggaagtcgattcccgtgctcaggtcgccatgatcgaaggcgtgtcc
gatgaggggccggcaggcagcaagcccgcgggcaccaaacgtcgcggcaagcgccgtcgc
aatggtcgtggacaaggctga
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