Cobetia marina: BFX80_16635
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Entry
BFX80_16635 CDS
T04789
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cmai
Cobetia marina
Pathway
cmai00300
Lysine biosynthesis
cmai00470
D-Amino acid metabolism
cmai01100
Metabolic pathways
cmai01110
Biosynthesis of secondary metabolites
cmai01120
Microbial metabolism in diverse environments
cmai01230
Biosynthesis of amino acids
Module
cmai_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BFX80_16635
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BFX80_16635
Enzymes [BR:
cmai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BFX80_16635
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AOM02580
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Position
4022406..4023677
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AA seq
423 aa
AA seq
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MDHFVYQDGVLHAEDASLATLAEQFGTPCYVYSRATLERHFKAYQNALGDHPHLICYAVK
ANSNLAVLNVLARLGAGFDIVSAGELERVLKAGGDPAKVVFSGVAKQAAEMQRALELGIK
CFNVESLPELERLNAVAGRLGRIAPVSLRINPDVDAGTHPYISTGLKANKFGIPVEQALE
VYETAAAMEHVKVVGVDCHIGSQLTELAPFLDSLERLLVLLDRLRERGIIIEHLDLGGGL
GVPYQNETPPEPFAYASALLERLARYEHGNEMTLLFEPGRSIAANAGVLLTRVEYLKPGE
EKNFAIIDAGMNDLIRPSLYQAWQNIVPVDTRESRASASYDVVGPVCETGDFLGKDRELA
IAPGDLLAVRSSGAYGFVMASSYNSRCRPAEVMVDGGQMHLVRRRERLEELWTGEQLLPE
GDD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggatcacttcgtatatcaggatggcgtgctgcacgccgaagacgcctctctcgccacg
ctggccgagcagttcggcacgccttgctacgtctacagccgtgccacgctggagcgccac
ttcaaggcctatcagaatgcgctgggcgaccacccgcatctgatctgttacgccgtgaag
gccaactccaacctggcggtgctcaacgtgctggcacgtctgggtgccggcttcgacatc
gtctccgccggtgagctggagcgcgtcctcaaggccggcggagaccccgccaaggtcgtg
ttctccggcgtcgccaagcaggccgccgagatgcagcgcgcgctggagctgggcatcaag
tgcttcaacgtcgaatcgctgcccgagcttgagcgcctcaatgccgtcgccggtcgcctc
gggcgtatcgcaccggtgtcgctgcgcatcaacccggacgtcgatgccggcacccacccg
tacatctccaccggcctcaaggccaacaagttcggcattcctgtcgagcaggcgctggag
gtctacgagaccgccgccgccatggagcacgtcaaggtggtaggcgtcgattgtcatatc
ggctcccagctgaccgagctggcgccgttcctcgactccctcgagcgcctgctggtgctg
ctggaccgcctgcgcgagcgcggcatcatcatcgagcatctggatctcggcggcggcctc
ggcgtgccctaccagaacgagacgccgccggagcccttcgcctacgcaagcgccctgctg
gaacgcctggcgcgctacgagcatggcaacgagatgacactgctgttcgagccgggtcgc
tccatcgccgccaacgccggcgtcctgctgacccgtgtcgagtacctcaagcccggcgaa
gagaagaacttcgccatcatcgatgccggcatgaatgacctgatccgtccgtcgctgtat
caggcgtggcagaacatcgtgcccgtcgacacgcgcgagtcacgtgcaagcgccagctac
gacgtggtcggcccggtctgcgagacaggcgacttcctgggcaaggaccgcgaactggcc
atcgcgccgggcgacctgcttgccgttcgctcctccggcgcctatggcttcgtgatggcc
tccagctacaacagccgctgtcgtcccgccgaagtgatggtggatggcggccagatgcat
ctggtgcgtcgccgcgaacgtctggaagaactgtggaccggtgagcaactgctgccggaa
ggtgatgactga
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