Corynebacterium macclintockiae: ACMX9P_05780
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Entry
ACMX9P_05780 CDS
T11427
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
cmal Corynebacterium macclintockiae
Brite
KEGG Orthology (KO) [BR:
cmal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmal03019
]
ACMX9P_05780
Enzymes [BR:
cmal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACMX9P_05780
Messenger RNA biogenesis [BR:
cmal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACMX9P_05780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
SH3_HelY
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
MTR4-like_stalk
Motif
Other DBs
NCBI-ProteinID:
XXN06376
LinkDB
All DBs
Position
1265551..1268223
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AA seq
890 aa
AA seq
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MTSFSPQVERFCAQYDFPLDDFQVQAAEAIDRGQGVLVAAPTGAGKTIVGEFAVFAAFHG
DGTCFYTTPIKALSNQKFNDLVERYGEANVGLLTGDVTINGDAPIVVMTTEVLRNMIYAD
SERLETLTHVVMDEVHFLADRSRGPVWEEAILNLDPRVILVSLSATVSNVEEFGGWLSAV
RGDTEIIVTEKRPVPLTQFMMVGRQILPLFEGSEQHLGAINRKVVAAAAKAEETGKRRGP
KRVDVIQHMATAGMLPAIYFIFSRVGCDAAVRALLVDRVDYSSPAEKEEILRTIDAGVAD
LTEEDLNVLGFRQWRRAVSRGFAAHHAGMLPAFRHIVEDLFARGLLKVCFATETLALGIN
MPARSVVLEKLVKFNGETHADLTPGQYTQLTGRAGRRGIDTKGNAVVLWSHGLDPYGVAD
LASTRTYPLDSTFRPGYNMAVNLIGTMGLDEAHRLLLRSFAQYQTNGAVVESAEQIEKRR
RELAQQEKQLKAAIRSVRRPSNSLNEDFQLVTEYGQLRRELSQEERRAKRMVVDEAATET
TSLLQSLQAGDVIALPTGKNPTTAVIVRSDHRGRPTIITDDGWVERVNPDMFGNTPVHIG
HMRLHKGVARNPKRQARGVAANLRRLQLDKPKKLKPRARRRSLHALELREQVHAHPVHAW
EGREELCRAAEQYLKAGRRLEFEQKEHPQESDSLSAQFNRILALLAELDYVELGDNTARI
TLEGERLSRIHHESDLLVAQCLRRGIWDDLDPAELAAVASTCVFENRRDSGAKDDGVPTE
PLATAISQTWRIYQELSTDEQRHNLTVTREPELGFATAVHQWTAGAPLEYCLRAAEASGA
TLTPGDFVRWCRRVIDLLDQIKLTGYSNEVKAASRKAVAAMRRGVVALDG
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgacatcctttagcccccaggtagagcgcttctgcgcccagtacgacttcccgctggac
gatttccaggtccaggcggccgaagccatcgacagggggcagggggtcctggtggccgcc
cctacgggcgcgggcaaaacgatcgtcggcgagttcgccgtcttcgccgccttccacggc
gacggcacctgcttttacaccacgccgatcaaggccttgagcaaccagaagttcaacgac
ctggtggagcgctacggcgaggccaacgtgggcctgctcaccggcgacgtcaccatcaac
ggcgacgcacccatcgttgtgatgaccaccgaggtcctgcgcaacatgatttacgccgat
tccgagcggctggagactctcacgcacgtcgtcatggatgaggtgcacttcctggccgat
cgctcccgcggcccagtctgggaggaggccatcctcaacctcgacccgcgcgtgatcctc
gtgtccctgtccgccaccgtctccaacgtcgaggaattcggcggctggctttccgccgtc
cgcggcgataccgagatcatcgtcaccgagaagcgccccgtgccgctgacgcagtttatg
atggtcggccgccagattctgcccctcttcgaaggctcggagcagcatctcggcgctatc
aaccgcaaggtcgtcgcagccgccgctaaggccgaggaaaccggcaagcggcgcggcccg
aagcgcgtggacgtgatccagcacatggccaccgccggcatgttgcctgcgatttacttt
atcttttcgcgggttggttgtgacgccgccgttcgcgccctcctggtcgatcgcgtggac
tactcatccccagcggagaaagaggagatcctgcgcaccatcgacgcaggagtggccgac
ctgacggaggaggacctgaacgtcctcggcttccgccagtggcgccgcgcagtctcccgc
ggcttcgctgcccaccacgccggcatgctgccggcattccgccacatcgtggaggacctc
ttcgcccgcggccttctgaaggtctgcttcgccacggagaccctggcgctgggcatcaac
atgcccgcccgctcggtggtgctggagaagctggtgaagttcaacggcgagacccacgcc
gacctgacccccggccaatacacccagctcacgggtcgcgcgggccgccgcggcatcgac
acgaagggcaacgcggtggtgttgtggagccatgggctggatccttatggagtcgccgac
ctggcgtcgacaagaacctaccccctagattccaccttccgtccggggtacaacatggcc
gtgaacctcatcggcacgatggggctggatgaggcacaccgcctgctgctgcgctccttt
gcccagtatcagaccaatggcgcggtggtggagagcgccgagcagatagagaagcgccgc
cgcgaacttgcccagcaggaaaagcagctcaaggccgcgatccgcagcgtgcgccgcccg
tcaaacagcctgaacgaggacttccagctggtcaccgagtacggccagctgcgccgcgaa
ttgtcacaggaggagcgccgtgccaaacgcatggtcgtcgacgaggcggcgacggagacc
acctcactgttgcagtctctgcaggccggcgacgtgatcgccctgcccaccggcaagaat
cccacgacggctgtcatcgtccgctccgaccaccgcggccgcccgacgatcatcaccgat
gacggctgggtggagcgcgtgaaccccgacatgttcggcaacaccccggtacacatcggc
cacatgcgcctgcacaagggcgtggcgcgcaacccgaagcgccaggccaggggagtggcc
gccaacctgcggcgcctgcagctggataagccaaagaagctcaagccccgggcgcgccgc
cgttccctgcacgcactggagctgcgcgagcaggtccacgcccacccggttcacgcctgg
gagggccgcgaggaactgtgccgcgccgccgagcagtacctcaaggccggccgccgcctg
gagttcgaacagaaggaacatccgcaggaatccgattccctgtccgcccagttcaaccgt
atcctcgcgctgctggcggagctggactatgtggagctcggcgacaacaccgcccgcatc
accctggagggcgagcgcctgtccagaatccaccacgaatccgacctgctggtcgcccag
tgcctgcgccgcggaatctgggacgacctggatccggcggagctcgcggccgtggccagc
acttgtgtcttcgagaaccgtcgcgattccggtgccaaggacgatggcgtgccgaccgag
cccctggccaccgccatcagccagacctggcgcatctaccaggagctttccaccgacgag
cagcgccacaacctcaccgtcacgcgcgaaccggagctgggcttcgccaccgcagtgcac
cagtggaccgccggtgccccgctggaatactgcctgcgcgcggccgaggcgagcggcgcc
accctgacccccggcgatttcgtgcgctggtgccgccgcgtgatcgacctgctggatcag
atcaagctgaccggttattccaatgaagtgaaggcggcctcccgcaaggcggtcgccgct
atgagacgaggagttgtagccctcgatggctaa
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