Cetorhinus maximus (basking shark): 144669352
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Entry
144669352 CDS
T12026
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
cmam
Cetorhinus maximus (basking shark)
Pathway
cmam03030
DNA replication
cmam03410
Base excision repair
cmam03420
Nucleotide excision repair
cmam03430
Mismatch repair
cmam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
144669352 (pold1)
03410 Base excision repair
144669352 (pold1)
03420 Nucleotide excision repair
144669352 (pold1)
03430 Mismatch repair
144669352 (pold1)
03440 Homologous recombination
144669352 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmam03032
]
144669352 (pold1)
03400 DNA repair and recombination proteins [BR:
cmam03400
]
144669352 (pold1)
Enzymes [BR:
cmam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
144669352 (pold1)
DNA replication proteins [BR:
cmam03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
144669352 (pold1)
DNA repair and recombination proteins [BR:
cmam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
144669352 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
144669352 (pold1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DUF6356
DNA_pol_B_exo2
divDNApol
Motif
Other DBs
NCBI-GeneID:
144669352
NCBI-ProteinID:
XP_078387841
LinkDB
All DBs
Position
29:17649356..17762242
Genome browser
AA seq
1118 aa
AA seq
DB search
MKDKMQFARNKPFGGSGDGNRPQAKRLRGDWDDEGPSQFEEELAYLDEVEAEMAMDAKEV
QASNDVVPIGNLFSSKVMNNKWQRPPAPKIDPKVDTITFQQMELEYYVGSYVAGMPGNKQ
GPVPVTRMFGITMEGNSVCCHVHGFMPYFYVKAPPDFGSQHLHDFQRELNAIVIKDMRSN
KDNISQVVLAVDICLKENMYGYGGNTKMPFLKITMALPRLIAPAKRLLEQGFRFGSTPMY
NYQSYEANIDFEIRFMVDSDVVGCNWIELPAGKYLLREEQTPGNSTTTRDNPRKVTLAQI
EVDVAWTDFISHPAEGEWQKIPPLRVLSFDIECAGRKGIFPEADKDPVIQIANMVLQQGE
KDPFIRNVFTLRSCAGIVGSQVLCFEKENELLKAWSEFVRVADPDIITGYNIQNFDLPYL
INRAQTLKVTTFPFLGRIPSIKSKIRDSSFQSRQMGRRENKVINIEGRVQFDLLQVLLRD
YKLRSYTLNAVSFHFLQEQKEDVQHSIISDLQNGNEQTRRRLAVYCLKDAYLPLRLLEKL
MCVINYMEMARVTGVPLPYLLSRGQQIKVVSQLLRQAMKHDLVMPVVKTEGGEDYTGATV
IEPVKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLKPGAVEKYNFSSDQFIKTPTGDQF
VKASVRKGLLPEILENLLSARKKAKAELKKETDQFKQKVLDGRQLALKVSANSVYGFTGA
QVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTIPNGYKADAKVIYGDTDSVMCKLGTE
TVEESMTLGREAAEWVSSHFIPPIKLEFEKVYFPYLLINKKRYAGLYFSSDPNNHDKMDC
KGIETVRRDNCPLVANLINTCLQKILIDRDPTGAVEHAKEVISDLLCNRIDTSQLVITKE
LTRTADEYAGKQAHVELAERMRKRDAGSAPNLGDRVPYVIISAAKGAAAYMKSEDPIYVL
ENNIPIDTQYYLEQQLAKPLLRIFEPILGEAKAEAVLLKGEHTRCKTVLTSKVGGLMAFA
KKRSTCIGCKAVLNDDSAVCSYCKSRQSELYQKEISQLKLLEEKFSRLWTQCQRCQGSLH
EDVLCTSRDCPIFYMRKKVQKDLGDQEKVMMRFGPPTW
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataaaatgcagtttgcaagaaacaagccgtttggcggcagtggtgatggcaat
cggccacaggcgaagaggctccgtggagattgggatgatgagggaccgtcacagtttgaa
gaagagctggcgtatctggatgaagtggaggcagaaatggcaatggatgccaaggaagtg
caggcatcgaatgacgtggttccaattggaaacctgttttcttccaaggttatgaacaac
aaatggcagcgcccgccagcacccaaaattgacccaaaagtggatacaatcaccttccag
cagatggagctggagtactacgtgggatcctatgttgctggaatgcctgggaataaacag
ggaccagttcctgttacccgaatgtttggaattacaatggaagggaatagtgtctgctgc
cacgtacatggattcatgccttacttctacgttaaggcaccacctgattttggttcgcaa
cacctccatgattttcagcgggagctgaacgcaattgtgattaaggacatgagatcaaat
aaggacaacatttcacaagtggttctggcagttgatatttgtctgaaggagaatatgtac
ggctatggaggaaatactaagatgccgtttctgaagattacgatggcactacctcgttta
attgcccctgcgaaacgcttgctagagcaaggattccgctttggttcaaccccaatgtat
aactatcagtcatatgaggccaacatagactttgaaatcagattcatggtggacagtgat
gttgttggctgtaactggatagaattgcctgctggaaagtacttgttaagggaagaacag
acaccaggaaactctactacaacaagggacaaccccagaaaggtgactttggcacagatt
gaggtggacgtcgcctggacggacttcatcagccatcctgccgagggcgagtggcagaaa
atccctccacttcgagtgctgagttttgacatagagtgtgctggcagaaagggtattttt
ccagaggctgacaaggaccctgtgatacagattgctaacatggtgctacaacagggtgaa
aaggaccccttcatccgtaatgtcttcacacttcggtcttgcgccggcatcgtgggctca
caggtcctgtgctttgagaaggaaaacgagctgctgaaggcttggtcagagtttgtccga
gtggctgatcctgatataattactggatacaacattcagaactttgacttgccatacttg
atcaaccgggcgcaaacactcaaggtgacaacattcccattcctgggtcgtattcctagc
attaaatctaaaatccgagattcttcgtttcagtctcggcaaatgggccgtcgagagaat
aaagtgatcaacatagaaggaagagtgcagtttgatctcctacaggtgttactaagagat
tacaaactgcgatcgtacacactcaacgcagtgagtttccactttctgcaggagcagaag
gaagacgtccagcactcaatcatctcagacctgcagaatggtaatgagcaaacacgaaga
cgattggccgtctactgcctgaaggatgcctacttgcccttgcggctattggagaagttg
atgtgtgtcattaactacatggaaatggccagagtgacgggcgtccccctcccctatctc
ctctcacgaggacagcaaatcaaagtggtctctcagttgctccgacaggcaatgaaacac
gacctggtgatgcctgtggtcaaaacagaaggtggagaggactacactggtgccactgtc
atcgagccagttaaagggtattatgatgtccctattgcaactctggatttttcctcccta
tatccatctataatgatggcacataacctctgttacaccaccctgctgaagccaggtgct
gtagagaaatacaatttttcttcagatcagttcattaagactccgacaggtgaccaattt
gtcaaagcttcagtgcgaaagggtttacttccagaaatcttggaaaaccttctgtctgca
aggaagaaggcaaaggcagaactaaagaaagagacggaccaattcaaacaaaaagttctt
gatggtcgtcagctcgccctgaaagtgagcgcaaattcggtgtatgggttcactggagca
caagttggcaagctgccttgcctggaaatatcacagagtgttaccggatttggccgacaa
atgattgaaaaaacaaaacagctggttgaatcaaagtacaccatcccaaatggctacaaa
gcagatgctaaggtcatttatggtgacacagattctgtgatgtgtaaactgggaacagag
acagtggaggaaagcatgacattgggtcgtgaggcagctgagtgggtctccagccacttt
attcctcctattaaactggagtttgaaaaggtatatttcccatatctgctgatcaacaag
aaacgctacgctggtttatacttttcctccgacccaaataaccatgataagatggattgc
aagggtatagagacggtgagaagggataattgcccactggtagccaacctcatcaatacc
tgtcttcagaagattttaattgacagggatccaacaggagcagtggaacatgcaaaggaa
gttatctccgatttgttgtgcaatcggattgacacctcgcagcttgtgattacaaaggag
ctcacgaggacggctgatgagtatgcagggaagcaagcccatgtggagttagcagaaagg
atgcgaaaacgagatgcaggcagtgcacctaatcttggagaccgagtgccctatgttatc
atcagtgctgcgaaaggtgcagcggcctacatgaagtctgaggatccaatttatgtcctg
gagaacaacattccaattgatacgcaatattatctggagcagcaacttgcaaaaccgctc
ctgagaatcttcgaacccatcttgggagaggccaaggcagaagctgtgctcctaaaggga
gaacacacaagatgcaagactgtgctgacgtcaaaggtgggagggctcatggcctttgcg
aagaaaagaagcacatgcatagggtgtaaagctgtgctgaatgatgacagtgccgtttgc
agttactgtaagtctcgccagtcagagctgtaccagaaggagatatctcagctgaagctg
ctggaggagaagttttcacgtttgtggacacagtgccagcggtgtcagggtagtctgcac
gaggacgtgctttgtaccagtcgggactgccctatattctacatgcggaaaaaagtgcag
aaggaccttggtgaccaggagaaagtgatgatgcgatttggacccccgacttggtga
DBGET
integrated database retrieval system
