KEGG   Cetorhinus maximus (basking shark): 144670331
Entry
144670331         CDS       T12026                                 
Symbol
dscaml1
Name
(RefSeq) cell adhesion molecule DSCAML1
  KO
K06768  Down syndrome cell adhesion molecule-like protein 1
Organism
cmam  Cetorhinus maximus (basking shark)
Brite
KEGG Orthology (KO) [BR:cmam00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cmam04515]
    144670331 (dscaml1)
Cell adhesion molecules [BR:cmam04515]
 Immunoglobulin superfamily
  Other
   144670331 (dscaml1)
SSDB
Motif
Pfam: I-set Ig_3 ig fn3 Ig_2 FN3_DSCAM-DSCAML_C V-set Ig_VEGFR-1-like_5th VEGFR1-3_N_Ig-like C2-set_2 Pur_ac_phosph_N Fn3_ROS1 Ig_6 C1-set V-set_CD47 Interfer-bind Receptor_2B4 Fn3_VIN3 Fn3_Dep-1_3rd Lit TED6
Other DBs
NCBI-GeneID: 144670331
NCBI-ProteinID: XP_078388938
LinkDB
Position
2:complement(219033083..219496057)
AA seq 1902 aa
MRGSVAVFKCLIPPSVQEYVSVVSWEKDTVSIIPEHRFHITSYGALYISDVQKEDALSTY
RCITRHKYSGETRQSNGARLSVSDPMESAPTVLDSFQSREVKTGETMELPCIASGYPNPA
IRWLKDNRPLPVDSRWTKRITGLMINNLRVEDSGTYICEVTNTFGSAEVTEIIKIIDPLR
VKVTPKKLKTGIGSTVILSCSVMGSPEYVIKWYRDTELIVPDGYISVRGINNNTLLITSA
QKSHSGAYQCFATRKSQTAQDFSIIVLEDGTPRIITSFSEKVVNPGEQFSLMCTAKGAPP
PTLTWTLDDESIIRDSGHRTNQYTLTDGTTVSHMNVTNPQIKDGGVYRCAARNLVGSAEY
QARINVRGSPSIRSMRNITAIAGRDTFINCRVIGYPYYSIKWYKDSILLPDNHRQAVFEN
GTLKLMDVQKGMDEGEYVCSVLVQQQHSISQRVHVAVKVPPLIQPFEFPPASIGQLLYIP
CVVSSGDMPIRITWRKDGQLILSGSGVTIETKEFMSSLQISSVSLKHNGNYTCIASNEAA
TVMRERRLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYH
PVPLTGRIQILANGSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPN
TTIAIKGQNKELNCTARGERPIIIRWEKEDTVIDPDRMFRYSVATKDNGEEVVSTLKITP
ADRGDSGFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSL
ILGFDIEYKNKSDSWDLKQSTRNINPTINQANIVDLHPASVYSIRIYSFNKIGRSEPSKE
LTVSTEEAAPDGPPMDVILQPITSQSIRVTWKAPKKELQNGVIRGYQIGYRENGPGSNGQ
YSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPDN
VKAVSISSDVVTIIWSPPPRSTLNGVLKGFRVIYWSVHRDGDWGEMQNITTMENRVELKG
LEKFTNYSVQVLAFTQAGDGVRSLVLYTQTKEDIPGPPAGIKAAPSSASSVVVAWLPPAK
PNGIIRKYTIFCSSPGSGQPAPSEYEASPETMYYQIPNLNRRQQYLLWVAAVTSAGRGNV
SNKVTGEPAAKAPAKIIAFGGTVTTPWMRDVFLPCRAVGDPGPTIKWTKDSEDSAIPVQV
DGHRMIFNNGSLFLRSVRAEDSGYYTCTATNTWGFDTIIVNLLVQVPPDQPRLTVSRTSS
STITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFINPTERSFKLDHLKCGTWYKVKLA
AKNSVGAGRISEIIEAKTHGREPAFNKDQHLFTHINSTHARLNLQGWNNGGCPITAIVMD
YRPKGTWPWLTLKTNLSNEVFLQDLREATWYELKMRACNSAGCGNETTHFATLDYDGSTI
PPIKSMQGEGDDVKKLFTIACPVILATVAVALLFIIRKKRKEKRLKRLRDAKSLAEMLIS
KNNRSFDTPVKGQPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATIPATESEFSQSVNPQ
SFCTGVSLHHPAMIQNTGPLIDMSDIRPGTNPVARKSVKSAHSTRNRYSSQWTLTKCQAS
TPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYE
HAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTPSEAGICRFTASPPQP
QDVDRGKNVAVPIAHRAEKSDYCNLPLYVKSDAFFRKSDIRDPCPVVPPREASIRNMARA
YQSQGRHMTLDPNSKPPIHPHATATLPQRTLTASGSTAAAASANTTAVTATASAANAPAE
PRLPAHTKIGGSRDSLLEMSTAGLGRSQKQGAGAYSKSYTLV
NT seq 5709 nt   +upstreamnt  +downstreamnt
atgcgtggaagcgtagctgtcttcaagtgcctcattcctccttcggtgcaggagtatgtt
agtgttgtgtcgtgggagaaagatacagtctcaatcatcccagagcatagattccacatc
acttcgtatggagccttgtacatatctgatgtacaaaaggaggacgcgctgtctacgtac
aggtgtatcaccagacataaatacagtggagaaacgcgccagagcaatggagcccgtctc
tctgtttccgatcctatggaatcagcacctacagtgttggacagttttcagtccagagaa
gttaaaaccggggaaaccatggagcttccatgcatcgcttcaggttatccaaacccagca
atccgctggctgaaagacaacaggcctttgccagtagatagcaggtggaccaaacgcatt
acaggcctgatgatcaataacctacgtgtggaagacagtgggacctacatctgtgaagtg
acaaacacctttggctcagcggaagttaccgaaatcattaaaatcatagatccactgagg
gtaaaagtgactccaaagaaactgaaaactggaattggcagtactgtcatcctgtcgtgt
agcgtgatgggctctcccgagtacgtcatcaagtggtacagggacactgagctcatcgtt
cctgacggttacatttctgtccgaggaatcaataacaatacacttcttatcacatctgct
cagaagagtcactcaggagcctaccagtgctttgccaccaggaaatcccaaactgcacaa
gacttctccatcatagtgttagaagatggaacgcctcgaatcatcacgtcctttagcgaa
aaggtggtcaatccaggtgaacagttttccctcatgtgcactgccaagggtgctcctccc
cctaccctcacctggacgctggatgacgagtcgattatcagagacagcggccatcggact
aaccagtacaccctgacagatggcactaccgtcagccacatgaatgtcaccaaccctcag
atcaaagatggaggggtttaccgctgtgcagcaagaaatctagtcggcagcgccgaatat
caagcgcgaataaacgtaagaggctccccgagtattcgctccatgagaaacatcactgcg
atcgctgggagagatactttcataaactgccgggtcattgggtatccctactattcaatc
aaatggtacaaagactcaatattacttcctgacaatcacaggcaggcggtttttgagaat
ggcactttgaagctcatggatgtgcagaaggggatggacgagggggagtatgtctgcagc
gtcctggtgcagcaacagcattccatcagccagagggtccacgttgcagtgaaagttcct
cccttaatccagccttttgagttcccgccagcctcaataggacagctcctctacatcccc
tgcgtggtatcgtcaggtgacatgcccattcgtatcacctggagaaaagacggtcagctg
attctctctgggtcgggggtcaccatcgaaaccaaagaattcatgagctccttgcagatc
tccagcgtgtccctgaaacacaacggtaattacacctgcattgccagcaacgaggcagcg
acagtcatgagagagcgacgactcattgtacgagtgccgcctcgttttgtggttcagccc
aataaccaggacgggatctatggaaaggctggagttctaaactgctcagtagatggatat
cctcctcccaaggtcatgtggaagcatgctaaaggaagcggaaatcctcagcagtatcac
ccagtaccactgacaggccgaattcagatcctggcaaatggttccttgttgattcgccat
gtcttggaagaagacattgggtattatctttgccaggcgagcaatggtgttggcacagac
atcagcaagtccatgtttcttacagtaaagatcccagcaatgattacatctcaccccaac
accaccattgccattaaaggccagaacaaggaacttaactgcacagcccgcggagaacgg
ccaatcattattcgctgggagaaggaggacacagtaattgacccggacagaatgttccga
tactcagtggctaccaaggacaatggcgaagaagttgtgtcgacgctgaagattacacct
gccgatcgaggagattctggcttcttctcttgccatgcaatcaattcctacggggaggac
cgaggactcattcagctgacagttcaagaaccacctgacccacctgagctggagatcaga
gaggtgaaagctcgcagcatgaacctccgctggactcagagatttgatggaaacagtctt
atcctgggcttcgacattgaatacaagaacaaatcagattcctgggatttaaaacagagc
actcgaaatatcaacccaaccataaaccaggccaacattgtggatcttcacccagcctct
gtttatagtataagaatctattcgttcaacaagatcggcaggagtgaacccagcaaagaa
ttaacagttagcacagaagaagcagctccagatgggcctcctatggatgtcatattacag
cccatcacttcccagagcatcagagtgacctggaaggccccaaagaaggaacttcagaac
ggggtgattcgaggctaccagatcggttatcgggaaaatggccctggcagtaatggccag
tacagtatcgtggagatgaaggccactggggacagtgaggtttacactctggacaatctg
aagaagtttgcgcaatacggtgtggtggtacaggcattcaacagagctgggacaggtccg
agttcctcagaaatcaacgctacaacacttgaggacgttcccagccaacctccagacaat
gtgaaagctgtgtcgatctcgtccgatgttgtcaccatcatctggtcaccacctccccga
agtaccttaaatggagtcctaaagggcttccgagtcatttactggtctgttcatcgagat
ggagactggggagagatgcagaatatcaccaccatggagaaccgagtggaactgaaagga
ttggagaaattcaccaattacagcgtgcaagtgctggcattcactcaggcgggagatggc
gttcgtagcttggtgctctacacacagacaaaggaagacattccaggacctcctgcggga
atcaaagcagccccctcctcagccagcagcgtagtggtggcctggttgccccctgccaaa
ccaaatggaatcatccgcaaatacaccatcttttgttcgagccccgggtctgggcagcca
gctcccagtgaatacgaggcttccccagagaccatgtactaccaaatccccaacctgaac
cgcaggcaacagtacctgctgtgggtagcggcagtcacatcagccggccgaggaaatgtt
agcaataaagtcaccggcgagccagcagcaaaggccccagcaaagattattgcatttgga
ggtacagtgaccactccttggatgagagatgtgtttctaccttgtagagccgtgggtgac
ccaggacctaccatcaaatggacaaaagacagcgaggactctgctatcccagtgcaagtt
gatggccacagaatgatcttcaacaatgggtcgctgtttcttcgttcagttagagcggag
gattctgggtattacacttgcacagccacaaacacctggggcttcgacacaattatagtc
aatcttctggtgcaagtgccacctgaccaacctcgtctgacagtgtctagaacctcatcc
tccaccattaccttggcttggatccctggtgacaatggtggcagctccatcagaggcttt
gtgctgcagtattccgttgataacagtgaagagtggaaagatgtcttcatcaaccccact
gagcgctccttcaaactggaccacctcaaatgtggcacttggtacaaggtgaagctggct
gccaagaacagtgtcggagctgggcgcattagcgagattattgaggccaagactcacggc
agagaacctgctttcaacaaggaccagcatctctttacccacattaactccacccatgct
aggctcaatctccaagggtggaacaatggcggctgccccatcacggctattgtcatggac
taccgtcccaaaggcacctggccttggctcaccttgaaaaccaacttatccaacgaggtg
ttcctgcaggacttgcgcgaggccacctggtatgagttgaaaatgagagcctgcaacagc
gctggatgtggtaacgaaacgacacacttcgccacgcttgactatgatggaagtactatc
ccaccaatcaaatcgatgcaaggagagggagatgacgtgaagaagttatttaccattgcc
tgtcctgtgatcctggcaacggttgccgtggcacttctgtttattatccggaagaaacgg
aaggaaaagcgtctaaagagactgcgagatgcaaagagcctggcagaaatgctgataagt
aagaacaatcggagtttcgataccccagtgaaggggcagccacaagggcctcggcttcac
attgacatcccaagggtacaactgctcatagaggacaaagaggggatcaaacagctggga
gacgacaaggccacaatccctgcgacagagtccgaatttagtcagtctgtcaacccccag
agtttctgcactggcgtgtctctccatcatccagcgatgattcagaacacagggccgctg
attgacatgtctgacatccgtcccggaaccaatcctgttgctaggaagagcgtcaaatcg
gcacacagcacacggaacagatactccagccaatggactctgaccaagtgtcaagcctct
accccagcccgaactttgacctctgactggagaactgtggggtcacagcatggaataaca
gtgaccgaaagtgacagctacagcgccagtctctcccaggacacagacaaaggccggaac
agcatggtttccacagagagcgcctcctccacctatgaggagctggcccgagcttacgaa
cacgccaagctggaggaacagctacaacatgccaagttcgagatcacagagtgcttcatc
tccgatagctcctctgatcagatgaccaccgggactaacgagaatgctgacagcatgact
tccatgagcaccccctctgaggcaggcatctgtagattcacagcatcccccccacagccg
caagatgtggaccgagggaaaaatgttgctgtgcccatcgcccacagagccgagaaaagt
gactattgcaatcttcccctgtacgtcaaatcggatgctttcttccgcaaatcagacatc
cgtgacccttgccccgtggtgccgcccagggaagcctccatccggaacatggccagagcg
taccaatcgcaaggccgccacatgaccctcgaccccaacagcaagccacccatccacccg
catgccacggccacattacctcagagaactctcaccgcgtcgggctccacagccgccgcc
gcctctgccaacaccaccgccgtcaccgccactgcttccgctgctaacgccccggctgaa
ccgcggctgcccgcgcacaccaaaatcggcggctccagagactcgctactagaaatgagt
acagccggactgggcaggtcacagaaacaaggagcaggcgcttattcaaagtcctacacc
ctggtgtaa

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