Cetorhinus maximus (basking shark): 144670451
Help
Entry
144670451 CDS
T12026
Symbol
stx5a
Name
(RefSeq) syntaxin-5a
KO
K08490
syntaxin 5
Organism
cmam Cetorhinus maximus (basking shark)
Pathway
cmam04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cmam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
144670451 (stx5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmam04131
]
144670451 (stx5a)
Membrane trafficking [BR:
cmam04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
144670451 (stx5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Apolipoprotein
DUF2207_C
DUF16
ABC-2_memb_rel
phi29_gp9_C
DUF6746
MCPsignal
SEO_N
YwqH-like
DUF7260
Motif
Other DBs
NCBI-GeneID:
144670451
NCBI-ProteinID:
XP_078389071
LinkDB
All DBs
Position
31:complement(6524432..6563014)
Genome browser
AA seq
348 aa
AA seq
DB search
MNTRRRHGPSSTEQGVYLGPTQTQVLTSKSFPSAPASSGPAPAFLEDIMSCRDRTQEFFA
ACKSMQNRQNGLQVNKPLLNAVRQRSEFTVMAKRIGKDLSNTFSKLEKLTILAKRKSLFD
DKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKESQNGRHLQTHSNTIVVSLQSRLASM
SNDFKSVLEVRTENLKMQRNRREQFSHATVSSLPPSAANGYGGSVLLQDDARRAGDVAID
MDAKTSQQLQLIDEQDSYIQSRADTMQNIEATIVELGSIFQQLAHMVKEQEETIQRIDAN
VEDTQLNVEAAHSEILKYFQSVTSNRWLMIKIFLILAVFFIVFVVFLA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgcgaagacgccacggtccctccagtactgagcagggagtctaccttgggcca
acgcagacgcaagtcctcacctccaagtctttcccttcagcccccgcctcttctggccca
gcccccgccttcctagaagacatcatgtcatgccgcgatcgcacgcaggagttctttgct
gcttgcaagtcgatgcagaacagacagaatggactgcaggttaacaagccgctcctcaac
gccgtacgccagcggagcgaattcaccgtcatggccaagcggatcggcaaagatttgagt
aacacgttctccaaactggaaaagctgaccatactggcgaagcggaaatccttgttcgat
gacaaagctgttgaaatcgaggagttgacgtacatcatcaaacaggatataaacagcctg
aacaagcagatcgcacaactgcaagacttcgtcagagccaaggagagccagaatggtcga
cacctacagacgcattccaataccattgtggtctcgctgcagtcccggctggcttccatg
tcgaacgattttaagtcggttcttgaagtgaggacagagaatctcaaaatgcagaggaac
aggagagagcagttctcacatgccacagtatcgagccttccaccatcagctgcaaatggt
tatggaggatcagtgttgctgcaagatgacgctcgcagagcaggcgatgtcgccattgac
atggacgccaagaccagccagcagcttcagctcatcgacgagcaggactcctacatccag
agcagagcggacacgatgcaaaacatcgaagccaccatcgtggaactgggctccatattc
cagcagcttgcacacatggtcaaggagcaggaggagaccatacagaggatcgacgccaac
gtcgaggacacacagctgaatgtggaggcggcccactcggagatcctgaagtacttccag
tccgtcacctccaaccgctggctgatgatcaagatcttcctcatcctcgctgttttcttc
atcgtctttgtggtgttcctggcctag
DBGET
integrated database retrieval system