Cetorhinus maximus (basking shark): 144683958
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Entry
144683958 CDS
T12026
Symbol
col4a6
Name
(RefSeq) uncharacterized protein col4a6 isoform X1
Organism
cmam Cetorhinus maximus (basking shark)
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Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
144683958
NCBI-ProteinID:
XP_078403704
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All DBs
Position
8:126108392..126523312
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AA seq
1697 aa
AA seq
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MSNWILLLVVGWLAADLVQAGAKNGYTGPCDGRDCSGGCKCLPEKGSRGQPGTLGPQGRS
GPPGFPGPEGLRGPKGEKGNSGNPGASGMKGEKGPIGVPGFVGLNGIPGHPGQQGPRGRA
GLDGCNGTIGDSGFPGTVGYPGSPGFPGENGQKGAKGEPAYISGGDGGLRGEPGLPGLDG
VPGPKGFPGLSGPVGTRGPPGFPGQSGPPGRQGLKGNMGLGFQGQKGGKGDVGLPGPPGP
PPATGQLEFVKPTGFPKGDRGEKGDKGLPGAPGRPGARGSPGYSDFGRSKGEKGIPGLPG
PRGSFGSDGSPGIPGRKGLPGYTGTSGRDGFPGMKGDQGEVGPPGPPAYIDGSGTLVKGP
PGDSGSQGRPGPPGVRGSQGQNGLPGRPGSSTQTQGSKGLPGFPGIVGPKGAKGAPGRMT
FSQPGPPGFLGPPGPPGPPGLSGAAIGTQGSPGAPGLPGVAGPPGFRGNKGYKGEPGECA
CSGAITGSGIQGPPGPPGEPGKPGFNSGKGQCGDPGPAGPPGQSGPPGIPGVPGASGTKG
QKGDSSVTSARGQKGDPGNPGPRGPSGTPGKLGRDGFPGLAGPPGKPGDSGTGFPGAKGF
PGSPGLKGPPGERGTPGVGFPGPPGFQGPPGDPGVDGTPGPSGFPGLPGDCCCGETAGEG
DLHTEGGITLPCVVPGSRGSVGRPGVPGLPGQKGRPGFPGSPGQPGFDGPKGPPGNPGLL
GESGRPGFPGPRGDQGLPGLPGLDGSEGSPGKMGLPGFPGQKGFPGDVYGAEPGAPGQPG
QPGKPGLKGAPGDSGFPGPKGFDGRPGFPSQKGERGVPGYPGRRGLPGPSGPDTQTGFPG
ETGRPGELGQPGFPGPKGSLGDRGPPGPSGMKGFPGIPGDRGYPGSPGLPGAPGEPGRTG
QQRRYGLKGEKGSPGLVGFPGLPGPQGRPGFDGRKGEPGGLGRPGFPGSPGRDGEKGERG
ASGLSGPPSLRSSPGLKGDSGRPGVPGFSGPRGNKGLPGPAGTPGLPGLRGLPGREKGRP
GDSGLPGFPGSPGQLGLKGSPGIIGFSGMTGEKGNDGFPGRSGYPGEQGAVGPKGERGDI
LPVPGNVGLKGEPGQAGYPGERGRTGLRGDPGFSGSPGPSGVKGSPGESGRPGGPGTPGL
QGAPGTPGYQGLQGRAGPPGPSAQFSRPGQKGLLGAPGLDGLNGLPGPKGPSGTPGVGLA
ALPGPPGLPGLKGEYGAPGTGIGAPGYPGPKGLRGDPGNSGPSGLPGKPGLPGSTIISNI
PGKLGDIGPPGFDGEGGLPGPPGPPGQPGLGFERGEPGNPGLPGASGRGGLRGNPGSPGI
PGAPGTPGLKGQRSEQGRMGFPGTDGPVGDQGYPGPKGDPGAQGSAGPPGFQGPPAQIGE
LPSNPGDPGYAGPDGPSGPVGDQGSPGFLGFPGIKGQPGKPGRVGPNGFPGPPGLVGDAG
LKGYPGPPGLEGNRGNPGAAGLPGLPARSVSVGYTLVKHSQSDTVPACPLGMNSLWDGYS
LLFVEGQEKTHNQDLGMAGSCLPRFTTMPFLYCNVDEVCHYANRNDKSYWLSTTAPIPMM
PVSNLQIRRYISRCSVCEVPSQAIAVHSQDVTIPQCPNGWRSLWIGYSFLMHTAAGAEGG
GQSLVSPGSCLEDFRSTPFIECNGARGTCHYFANKYSFWLTIVEASRQFEESPPSETLKA
GQLRTRVSRCQVCIKYL
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattggatcctgctccttgtcgtgggctggttggctgctgatcttgtccaagcg
ggggcaaagaatggctacactggaccatgtgatggtcgagactgcagcggaggttgcaaa
tgtttgccagagaaagggtcaaggggtcagccaggaacgcttgggccacagggacgtagt
gggcccccgggatttcctggacctgagggtttaagaggaccaaaaggtgaaaagggtaac
tccggtaacccaggagctagtggcatgaaaggagaaaagggtccgatcggtgtcccagga
ttcgtcgggctgaacgggatcccaggtcacccaggtcaacaaggtccaagaggccgcgct
ggtctggatgggtgcaatggtaccataggagactcgggcttccctggcactgttggctat
ccaggatccccaggattcccaggtgaaaatggccaaaaaggggctaaaggagagccagcc
tatatctctggaggcgatggtggattgaggggtgagccgggcctaccaggtttggacgga
gttcctggtccaaagggttttccaggtctctcaggccccgtgggtaccagaggaccacca
ggctttccaggtcaatctggtcccccaggccgccaaggattaaaaggcaacatgggattg
ggattccaaggacagaaaggaggaaagggagacgtgggcctgcccggtcctccaggccca
ccacctgccactggtcaacttgagtttgttaaaccaaccggatttccaaaaggggacaga
ggtgaaaagggcgataaaggattacctggtgctcctggaaggcctggagcacgtggctcg
ccgggttattcagatttcgggagatcaaaaggagagaaaggaatccctggtcttccaggc
ccaaggggatcttttggttcagatggatctcctggaattcctggaaggaagggcttacca
ggctacactgggacaagtggaagagatggtttcccaggaatgaagggtgaccagggtgaa
gtgggtccaccaggtcccccagcttacatcgatggaagtggtactcttgttaaaggtcct
cctggggattccggttcacagggacggccaggtcctccaggagtccgaggttctcaaggc
cagaacggattacctggacgcccaggctcttcaacacaaactcaaggttccaagggttta
ccaggattcccaggcattgtaggacctaaaggtgcaaagggtgcaccaggaagaatgaca
ttttcacaaccaggcccaccaggtttcctgggcccgcctgggcctcctggtccaccaggt
ctttcaggcgccgcgattgggacccaaggatcacctggagctccagggttgcctggagta
gctggaccaccgggattcaggggaaataaaggatataaaggtgagcccggggaatgtgct
tgcagtggggcgattactgggagtggtattcaaggccctcctggtcctcctggtgaacca
ggaaagcctggtttcaatagtggtaaaggccagtgtggagatccaggaccagcaggacct
ccaggacaatcaggtcctccaggtattccaggcgtgccaggagcatcaggtacaaaagga
cagaagggagattcatccgttacatcagcaagggggcaaaaaggagatcctggcaatcca
gggccaaggggaccttcaggcactccaggaaaactgggaagggatggattcccaggtctg
gcaggacctccaggtaaacctggtgacagtggaacaggttttccgggtgctaaaggtttc
ccaggcagtcccggcctaaagggtcccccaggtgaaaggggcacgccaggcgttggattc
ccaggccctcctggtttccaaggtcctccaggtgatccaggagttgatggaacaccagga
ccatcaggtttcccagggttaccaggtgactgttgctgcggggaaactgctggtgaaggc
gaccttcacacagagggaggaatcactttgccgtgtgtggtcccaggcagtagaggctcg
gtgggtcgacccggagtaccagggctcccaggtcagaaaggtagaccaggttttccaggc
agtccaggacaaccaggatttgatggaccaaaaggacctcctggaaatccaggcttgttg
ggagaatcaggccgcccagggtttcccggaccacgtggtgatcagggactaccaggtctc
cctggactggatggaagtgaaggctctcctggaaaaatgggtcttccaggatttcctggt
caaaaaggattcccaggtgatgtgtatggtgcagaaccaggtgccccaggtcaaccaggt
cagccaggaaaaccgggattgaaaggagctccaggagattctgggtttccaggacctaaa
ggtttcgacggtagaccagggtttccaagtcaaaaaggtgaaaggggagttccaggctac
cctgggcgtcgaggcttgccgggccctagtggaccagatacccaaacaggtttcccagga
gaaacggggagacccggtgagctcggacaaccaggtttccccggaccaaaaggttcactc
ggagatcgtggacccccgggtccttctggtatgaagggatttccaggaattccaggagat
agaggttaccctgggtcaccaggcctgcctggtgctccaggagagcctggtcgtacaggc
caacagcgtcgatatggattgaaaggtgaaaaaggttctcctggcctggttggattccca
ggattgccaggccctcaaggccggccaggatttgacggtcgtaaaggagaaccaggcggc
ctaggaagaccaggcttcccaggttccccaggcagagatggagaaaagggtgagagagga
gctagtggattgtccgggcctcctagtttaagatccagtcctggattgaaaggtgactct
ggcagacctggagttccagggttttctgggccaagaggaaacaaaggcttgccaggacca
gctggtacccctggactcccaggattaagaggcctccctggacgtgagaaaggtagacca
ggtgattctgggcttccgggatttcctggatcaccagggcaactaggactgaaagggtcc
cctggcattattggtttctctggaatgacgggagaaaagggtaatgatggttttccaggt
cgttctggttaccctggggaacagggtgctgttggcccaaaaggtgagcgtggtgatata
cttcctgtccctggaaatgtaggattaaaaggagagcctggtcaagcaggatacccaggt
gaaagagggagaactggtttgcgcggtgatcctggtttctctggtagtcctgggcctagt
ggagtcaaaggatcaccaggagaaagcggtcgaccaggtggcccaggtactcccgggctg
caaggggctcctgggactccaggttaccaaggattgcaaggtcgtgcgggtcctccaggg
ccttcagctcaatttagtcgaccaggacagaaaggactcctaggcgctccaggactagat
ggtttgaatggtttgcctggacctaaagggccctcaggaacaccaggtgttggtttggcg
gcactgccaggacctcctggccttcctgggctaaagggtgaatacggtgcaccaggaact
ggtataggggcaccaggatatcctggaccaaagggacttcgaggagatccaggtaatagt
ggaccatcgggtcttccaggaaaaccaggtcttccgggaagcactatcatttcaaatatt
cctgggaagctaggtgatattggtccacctggatttgatggtgaaggaggtcttccaggc
ccacctggtcctcctgggcagccaggcttgggttttgaaaggggggaacctggtaaccca
ggccttccaggagcctcaggacgaggaggcctgcgggggaaccctgggtctcctggaatc
ccaggagccccaggcactccaggactgaagggccaaaggtcagaacaaggcagaatggga
tttccaggcacggatggtcctgtgggcgatcaaggttacccaggacccaaaggggaccct
ggtgctcaaggctccgcaggaccaccaggattccaaggaccaccagcacaaatcggtgaa
ttgccctcaaacccaggtgatccaggttatgcaggacctgatggaccgtcaggtcctgtg
ggagaccaaggcagccctggtttcttaggatttccaggtatcaagggccagcctggaaaa
ccaggtagagtgggaccaaatggttttcctggccctccaggtttggtgggagatgcaggc
ctgaagggataccctggaccacctggattagaaggtaaccgtgggaacccgggagcagca
gggctgccagggctgccagctcggagtgtgagtgtgggctacacgctggtgaagcacagt
cagtcagatactgtgccagcctgcccactgggaatgaacagtttgtgggacggatacagc
ttgctgtttgtggaaggacaagaaaagactcacaaccaggatctgggaatggctggctca
tgcttgccccgtttcaccaccatgcctttcctttactgtaacgtcgatgaggtgtgccac
tatgcaaacaggaacgacaagtcctattggctttctaccactgcccccatccccatgatg
cccgtttccaatctgcagatccgacgctacatcagccgctgttcagtttgcgaggtgcca
tctcaggccattgccgtgcacagccaggacgtaaccattccacagtgccctaatggttgg
cggagtctctggataggctactccttcctcatgcacacggctgctggtgctgaaggtggg
ggccagtctctcgtgtcgcccggctcctgcctggaggacttccgctccacgcccttcatt
gaatgcaacggcgcccgcggcacatgccactactttgccaacaagtacagcttctggctg
accatcgtggaggcgagccggcagtttgaggagtcgccgccctcggagacactgaaagcg
ggccagctgcggacacgggtcagccgctgccaagtctgcattaagtacttgtag
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