Cetorhinus maximus (basking shark): 144684733
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Entry
144684733 CDS
T12026
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
cmam Cetorhinus maximus (basking shark)
Pathway
cmam04136
Autophagy - other
cmam04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cmam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
144684733 (atg13)
04136 Autophagy - other
144684733 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmam04131
]
144684733 (atg13)
03029 Mitochondrial biogenesis [BR:
cmam03029
]
144684733 (atg13)
Membrane trafficking [BR:
cmam04131
]
Autophagy
Autophagosome formation proteins
ULK complex
144684733 (atg13)
Atg1 complex
144684733 (atg13)
Mitochondrial biogenesis [BR:
cmam03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
144684733 (atg13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
144684733
NCBI-ProteinID:
XP_078405017
LinkDB
All DBs
Position
9:76555129..76639295
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AA seq
576 aa
AA seq
DB search
MANVCVRVRWSCLRSVAEIFFFTMDGELSPQDKKDLDKFIKFFALKTVQVIVQARLGEKI
CTRSSSSPTGSDWFNLAIKDIPEVTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELE
TWCLEMNEKCDKEIKVSYTVYNRLSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFG
EVQLIGLGDGFQTVRVGMVGTPVGTITLSCAYRTNLAFMSGRQLERTQPIMGIIIDHFVD
RPYSGSSPLHPCNYRATGEDDAGAFPSVEDSQEVCTTSFSTSPPSQCVFTVSKTHFQTPR
PVVMDTLKVPLLGLTFTHQLYSSRLSYQPFATLGGGSADLACCPAALTAGVNTAHPHQMI
VPSKEGGIPVLPLHPAPGTQADGDRVPPCNSTDMNQHVAATPSSSGEVELLSKSSEGKSA
TPQDVLETTFTRKVGAFVNKPANQVIAANMDLPFAVFAPKIVESEDTDVMVNPPDSPTPE
SPLHASLHSDQSSGSSGLTQDEFVMVELKPAFSKDDFLPMDLGTFYREFQNPPQLSSLSI
DISAQSMAEDLDSLPEKLAIYEKNMEEFDAFVDTLQ
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgtgtgcgtcagggtgaggtggtcatgtttacggagcgtggcggagattttt
tttttcaccatggatggtgaactgagccctcaggataagaaggacctggataagttcatt
aaattctttgccctgaagactgtccaggtaattgtgcaagcacggctcggagaaaagata
tgcacccgttcatcctcttctcctacaggctcagactggtttaaccttgcaataaaggac
ataccagaagtcacccatgaggctaagaaggcactggcagggcaacttccgggaattgga
cggtcaatgtgtgtggaaatttctctcaagacgtctgagggagattctatggaactggaa
acttggtgcttggaaatgaatgaaaaatgtgataaagaaattaaggtttcctacactgtc
tacaacaggctgtctttgctactgaagtcgcttcttgcaatcacaagagtgacacctgca
tataaactatccagaaagcagggacatgactatgtaatcctatacaggatatattttgga
gaagtgcagctgattggactgggtgatggttttcagactgtacgggttggaatggttgga
acccctgttggtactatcacgctgtcatgtgcataccgaactaacctggctttcatgtct
ggcaggcagctggagcggacccagccaatcatggggattatcatagaccactttgtagat
cgtccctatagtggatcttcaccattacacccatgtaactacagggcaactggtgaagat
gatgcaggtgcttttccttctgtagaagactcccaggaagtctgcaccacttctttctct
acttctcctccctcgcagtgtgtgtttactgttagtaagacacattttcagactcccagg
ccagtggtgatggacactctgaaggtccccctgctaggcttgacctttacgcatcaactc
tacagctcacgcctttcctatcagccctttgctactcttggtggtggttcagcggaccta
gcctgttgcccagcagccttaactgctggtgtaaatactgctcatccacatcagatgata
gttcctagcaaagaaggaggtatacctgttttacctctacatcctgctcctggtacccag
gctgatggtgatagggtgcctccctgtaattcgacagatatgaatcaacatgtggcagca
actccttctagcagtggtgaagtggaattgttatcaaagagcagtgaagggaagagcgca
acaccacaagatgtactggagaccacctttaccaggaaagtgggagcatttgttaataaa
ccagccaatcaggtcattgctgccaatatggatttaccatttgctgtttttgcaccaaaa
attgttgaatctgaagacactgatgtcatggtaaatccacctgattcccctaccccagaa
tcgcctctgcatgccagtcttcattcagaccagtccagtgggagcagcggcctcacacaa
gatgaatttgttatggtggaactcaagccagccttttccaaggacgattttctacctatg
gacctgggcaccttttatagggaattccagaatcctcctcaactgagcagcctctccata
gacatcagtgctcagtcaatggctgaggatctggattccttgcctgagaaactagcaatc
tatgagaagaatatggaagaatttgatgcctttgtagatactctgcagtaa
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