Cetorhinus maximus (basking shark): 144686567
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Entry
144686567 CDS
T12026
Symbol
itgav
Name
(RefSeq) integrin alpha-V
Organism
cmam Cetorhinus maximus (basking shark)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
LYRIC
Motif
Other DBs
NCBI-GeneID:
144686567
NCBI-ProteinID:
XP_078408033
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Position
11:complement(48986283..49126717)
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AA seq
1037 aa
AA seq
DB search
MAPAGSGTGRRALAVILFTLSCCYGFNLDTAKPSVYSGPQGSYFGFAVDFFTPLPTKMNI
LIGAPKANTSQPDIVEGGAVYKCPWINGLSSCEQFQFDTTGNRVKSQDDLLEFKSYQWFG
ASVRTHGDKILACAPRYHWRTLGTQEREPVGTCFLADGEKIVEYAPCRSGRTRADGQGFC
QGGFSIDFTTAGRVVLGGPGSFYWQGQLISDEVQEIVTMYNSSELVTKFPHQVATRNAEA
VYDDSYLGYSVAVGNFTEDSVEDFVTGIPRGAKSLGYVTILNGVNMASVYNFTGEQMAAY
FGYSVAVTDLNNDGRDDLLVGAPLFMVRGSDGKYREVGQVYVYLQDASFSFTSPLKLTGT
ETYARFGSSIAPLGDLDRDGYNDIAIGVPYAGEDHKGLVYIYNGNFSGLNPHPSQTLKGQ
WASDKMPASFGYAMQGGVDIDANGYPDLIVGAFGVDKAVVYRARPVIHVNASLRVNPSIL
NAENKSCTLKENVMVSCFTVTYCLSAFGIKVTDYVDFNVELHLDRQKQKGAIKRAMFLHS
SLSSYEKKMQVENSRRKVCEELKAFLRDESEFRDKLAPIDIYMEYSLDLKTATEGTRLQP
ILNKFTPNNITEKVRILLDCGDDNICKPDLKLSVQGDRKQLYIGDENPLTLNINAQNDGE
GAYEAGLYIVLPPQADYVGVVRNNKSLTRLSCAYMAENETRTVVCDLGNPMKAGTNLWAG
LRFSVRELQEAEAAVTFDLQIRSSNKHNATSEVVSYTVDITVLAQVDIRGVSSPDQLFLP
IANWKANPESEEEVGPLVIHVYEIRNNGPSAFSKAILDLQWPYRYKEAYLLYIMEYTPEG
PMNCTSDTIINPLSLKTAGSTANQTSSTKSPKNLHHIKRREITESEGIEALGCDKAECLK
INCQIGKLERGKSVVLHIRSRLWGETFMKKENQSYSLMASASYSVIEMPYKNFSAELPNG
SIVVTTLVTWDKAITPHPVPVWVIILALLAGLLLLALLVFIMYKIGFFKRVRPPRKDSIE
RQQLQPQEMNGDGAAET
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggcgggttcaggcacagggcgccgggcgctggcagtgatcctcttcaccctc
tcctgttgttacgggtttaatttggacactgccaagccgtccgtttattccggacctcag
ggtagttacttcggatttgctgtggattttttcacacctctcccgacaaagatgaatatt
ctaattggagccccaaaggcaaacacttctcagccagacattgtcgaaggtggggcagta
tacaaatgcccctggatcaacgggctcagcagctgcgagcaattccaatttgacacgaca
ggtaacagagttaaaagccaggatgacctattggaattcaagtcctaccagtggtttggt
gcatctgtgagaactcatggcgacaagattctggcttgtgctccccgttatcactggaga
acattaggaactcaagaacgcgaaccagtgggtacctgtttccttgcagatggggaaaag
atagtggagtatgcaccgtgtcgatcaggcagaactagggctgatggtcaaggattttgt
cagggaggtttcagcattgactttacaacggctggcagagtggttcttgggggacctggc
agtttttactggcaaggtcagttaatctctgatgaagtacaagaaattgtgacaatgtac
aatagttcagagctggtcacaaagtttccacatcaagttgcaactcgtaatgcagaagct
gtgtatgatgacagctaccttggctattcagtagctgttggaaattttaccgaagattca
gtagaagattttgtaactggtatcccaagaggagcaaagtctttaggctatgtgactatc
ttaaatggagtgaatatggcatctgtctacaattttactggggaacagatggctgcttac
tttggttactctgttgctgttactgacctcaacaatgatggacgtgatgaccttttggtt
ggagcacctctttttatggttcgtggttctgatggaaagtatagagaagtgggacaggtg
tatgtttatctacaagatgcttcatttagctttacaagtcccctgaagctgactggcacg
gagacctatgccaggtttgggtcatcaattgcgcctcttggagaccttgatcgagatggt
tataatgatattgcaataggagttccttatgcgggagaagaccataaaggtcttgtttac
atttataatggaaacttctctggtctaaatccacatccttctcagactttgaaaggacag
tgggcctcagacaaaatgcctgcaagttttggttatgccatgcaaggtggtgttgatatt
gatgcaaatggatacccagacttaattgtgggagcttttggtgttgacaaagcagttgtt
tacagagccagaccagtaattcatgtcaatgcttctttacgagtcaacccatcaatcttg
aatgcagagaacaaaagctgtacactaaaagaaaatgtcatggtatcctgttttacagtt
acatattgcttaagtgcatttggaataaaagtcacagactacgtggattttaatgtggaa
ttgcatctggatagacaaaaacagaagggtgctatcaagagagctatgtttcttcacagt
tctctttcctcttatgagaagaaaatgcaagtagaaaatagccgaaggaaagtttgtgaa
gaattgaaagcctttctgagagatgagagcgagttcagagacaaattggctcccattgat
atctacatggagtacagcctagatttaaaaactgcaacagaggggactagactgcaacca
atcctcaacaaatttactccaaataatatcaccgaaaaggtacgtattttattggattgt
ggcgatgacaacatctgtaaacctgatctcaaactctctgtgcaaggagatcgaaagcag
ctgtacattggtgatgagaatcccttaaccctgaatataaatgcacagaatgatggtgaa
ggagcctatgaagctggactctacattgtgttaccaccacaagcagattatgttggggtt
gttcgcaacaataaaagcctcactagattgtcctgtgcttacatggcagaaaatgaaacc
cggactgtagtttgtgaccttggaaaccctatgaaagctggaacaaatctctgggctggt
ctccgattcagtgtgcgtgagctacaagaggctgaggcagctgttacctttgacctgcaa
attcgaagttccaacaaacacaatgcaacgagtgaagtggtttcttacacagttgacatt
actgtcctagctcaagtggatatccgaggtgtctcttctcctgatcagttgtttttacct
attgcaaactggaaggcaaaccctgagagtgaagaggaagtgggtccactggtcatacat
gtctatgagatacggaataatggaccaagtgcatttagtaaagccatattagacctacag
tggccctacaggtataaggaggcttatctgttgtacataatggaatacacgcctgaaggt
cctatgaactgcacatccgatacaattatcaacccactgagcttaaagactgcgggttca
acagcaaaccagacatcttcaactaaaagtccaaaaaatctgcatcacataaaacgcaga
gagataactgagtcagaaggaattgaggcgctgggatgtgacaaagcagaatgtctgaaa
ataaactgtcagattggcaagctggaaagaggcaagagtgtagttctgcacatcagatca
cgactgtggggtgaaacattcatgaagaaagagaatcaatcctactccttgatggcttca
gcatcatacagtgtcatagaaatgccatataaaaacttctctgctgaacttcccaatgga
tccattgtggttaccaccttagtgacttgggacaaggcgataactcctcacccggtgcca
gtttgggttattatattggcactccttgctggtctactgcttctagctcttttggtattt
atcatgtataaaattggttttttcaaacgtgtccgaccaccacgcaaagattccattgaa
cggcaacaactccagccacaggaaatgaatggagatggggctgcagaaacgtaa
DBGET
integrated database retrieval system
