Cetorhinus maximus (basking shark): 144687872
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Entry
144687872 CDS
T12026
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
cmam Cetorhinus maximus (basking shark)
Pathway
cmam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
144687872 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmam04121
]
144687872 (ube3b)
Enzymes [BR:
cmam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
144687872 (ube3b)
Ubiquitin system [BR:
cmam04121
]
Ubiquitin ligases (E3)
HECT type E3
144687872 (ube3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
144687872
NCBI-ProteinID:
XP_078410555
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All DBs
Position
12:complement(111489123..111544564)
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AA seq
1068 aa
AA seq
DB search
MFSTAQTSKTQFLVKARAAREERKGQKERERATIQIQALVRRYLCRCRLLREIRMEVDDF
FDINEANSSKRSALAIFKITRKLLFVYHMKEDKERLQKLCRCILNSMEVENEPKVCYVSM
ALSKDLTLSWIKQVKDLLWLCCEFLKLLKPDILQDCKFITLYLTMLVTFTDTSTWKILRG
KGEVLRPAMNHICANIMGHLNQKGYYTVLQILLTNGLARSKPSLSKGTLTAIFTLALRPV
IAAHFSDNLLRSFLLHIMSVPALVTHLSTIVPECMAMVHSHELLRKFILFLSRDEQCGDI
CVCLEGSHTLCLQGNLIYLAYLSENVLEEETNHFVSALTAMLSYCQKYVSQKKSNLTHWH
PVLGWFSQTVDYGLNEAMPLVTKQLQYLWSVRVIRMLFHDVLSKKLVENQDITHTQHSSP
SNNIHVKNLFRRAFQKSASMRNILKPVGGKRVDSPEVQKVCSICVLYQTALTTLTQIRLQ
ILTGLTYLDDLLPKLWAFICELGPQGGLKLFLECLNNDTEESKRLLAMLMLFCDCSRHLI
TILDDIEVYEEQVSFKLEELVTISSFLNNFVFKMIWDGIQENAKGEQLELFHSVHGWLMT
LYERDCRRRFAPEDHWLRKDLKPSLIFQDLDKGKKRAQLLLQYIPHTIPHKNRVLLFRNM
VTKEKESLGLVETSSASPHVIHITIRRSRMLEDGYEQLRRLPVNTMKGVIRVKFVNDLGV
DEAGIDQDGVFKEFLEEIIKKVFDPALNLFKTTSGDERLYPSPTSYIHENHLQLFEFVGK
MLGKAVYEGIVVDVPFASFFLSQVLGHHHSALYSSIDELPSLDSEFYKNLTSIKRYDGDI
GDLGLTLSYDEDVMGQLVCHELVPGGKTIGVTNENKISYIHLMAHFRMHTQVKDQTIAFI
RGFRSIINPEWLRMFSTPEVQRLIAGDNAEIDLEDLKKHTVYYGGFHGSHRVITWLWDIL
ARDFMAEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFT
IRKKEPGGRLPTSSTCFNLLKLPNYSKKSILREKLRYAISMNTGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcactgcacaaacttccaaaacacagttcctggtcaaagcccgggcggctcgg
gaagagaggaaagggcagaaggaacgtgagcgtgcaactattcagattcaagcactggtt
aggaggtacctctgcaggtgtcggctgcttagagaaatcaggatggaagttgatgatttt
tttgacatcaatgaagcaaattcatcaaaaagaagcgcacttgctatatttaaaatcaca
agaaagttactctttgtgtatcacatgaaagaagataaagagagacttcagaagctgtgc
cgctgtatccttaatagcatggaagtagagaatgagcccaaggtctgctatgtgtcaatg
gcactctccaaagatctcaccctgtcatggatcaaacaagttaaagacctactctggctc
tgctgtgagtttctgaagctacttaagcctgatattctgcaggactgtaagttcatcaca
ttgtatctcaccatgctggtcacattcacagacacctcaacatggaaaatactgagaggg
aaaggagaagttctgagacctgccatgaaccacatctgtgccaacatcatgggacatctc
aatcaaaagggatattacactgtgctacagatattgttaacaaatggactggcaagatcc
aaaccatctttgtccaaaggcactttaacggccattttcacccttgcattacgcccagtg
attgctgcccatttctcagacaacctactccgttcctttctgctgcacatcatgtcagtc
ccagcactggtgacacatctctctacgatagtacctgagtgtatggctatggtccattcc
catgagctgctacggaaattcatcctgtttttaagtcgagacgagcaatgtggtgatatc
tgtgtgtgcttggagggaagccatacgctttgtctgcaggggaatctaatttatctggcc
tacctgtctgagaatgtgttggaggaggaaacaaatcactttgtcagtgcgctgactgcc
atgctctcatattgccagaaatatgtatctcagaagaagtccaacctgacgcactggcac
cccgtacttggttggttctcccaaactgttgattatgggttgaacgaagcaatgcctcta
gtcaccaagcagttgcagtacttgtggagtgtccgggtcattcgtatgcttttccatgat
gtgttgagtaagaaactggttgagaatcaagacataacacatactcaacactcgagtcct
tcaaacaacattcatgtcaaaaatctcttcaggcgagcatttcagaagtcagcctccatg
cgaaacattctgaagccagttggcgggaagcgtgtggactctccagaagtgcagaaggtt
tgcagtatctgtgtgctatatcagacagcactgactacactcacccagattcgactccag
attcttactgggttaacctatttagatgacttgttgcccaagttgtgggcgttcatttgt
gaactaggacctcaagggggcctgaagctattccttgagtgtctgaacaatgataccgag
gaatccaagcgacttcttgcaatgctgatgttattttgtgactgctcacggcaccttatc
acgatcttggatgacattgaggtgtatgaggagcaagtctcattcaagctggaagagctg
gtcaccatctcctccttcctgaataattttgtgtttaaaatgatctgggatggcattcag
gaaaatgcaaaaggagagcaactggagctgttccactccgttcatgggtggctgatgact
ctgtatgagcgagactgccggcgacgctttgctcctgaggatcactggctacgcaaggat
ctgaaacccagcttgatattccaggatttggataaagggaagaagagggcccagttacta
ttgcagtacatcccacacactattccgcacaaaaacagggtgctgcttttccggaacatg
gtaacaaaggagaaagagtcactggggttggtggagacaagttctgcatcccctcacgtc
atccacattacaatacgcagatcccgaatgcttgaggatgggtacgaacagttacggcga
ctacctgtaaacactatgaaaggagtcatcagagtgaaatttgtgaatgatctaggagta
gatgaggctgggattgaccaggatggtgtcttcaaagaatttttagaagaaatcatcaag
aaggtttttgaccctgctctgaatctcttcaagacgaccagtggagatgagcgattgtac
ccttctcccacttcttacatccatgagaatcacttgcagctgtttgaatttgttggaaag
atgttgggcaaagctgtctatgagggaattgtagtggatgtcccatttgcttccttcttc
ctcagtcaagtactgggacatcatcatagtgctttgtacagctcaatcgatgaacttccc
tccctggactcggaattctacaaaaatctcacctccataaagcgttacgatggtgacatt
ggtgaccttggtttgacattatcctatgatgaggatgttatgggtcagcttgtttgccat
gagctggtgcctgggggaaagaccattggagttaccaatgaaaataaaatcagttacatc
cacctcatggctcacttccgaatgcacactcaggttaaagatcagacgattgctttcatc
cgaggattccggtccattattaacccagaatggctccgtatgttctcaactcctgaagta
caacgtttaattgctggagacaatgcagagatcgaccttgaggatctcaagaagcatact
gtgtattatggtggttttcatggcagtcaccgtgttattacctggctgtgggatatcttg
gctcgagatttcatggcagaagaacgagccatgtttcttaagtttgtcactagctgttct
cggccgccactcctgggctttgcctacctcaagccacccttctccattcgatgtgtggag
gtgtcagatgatcaggacactggagatacactaggaagtgtgctacggggtttctttacc
atccgcaaaaaggaaccaggtggtcggctgccaacctcttccacctgcttcaaccttctt
aaacttcccaactacagtaagaagagcatcctgcgagagaagctccgctatgcaatcagt
atgaacactggatttgagctctcctaa
DBGET
integrated database retrieval system
