Cetorhinus maximus (basking shark): 144688808
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Entry
144688808 CDS
T12026
Symbol
med16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
cmam
Cetorhinus maximus (basking shark)
Brite
KEGG Orthology (KO) [BR:
cmam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmam03021
]
144688808 (med16)
Transcription machinery [BR:
cmam03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
144688808 (med16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
WD40_WDHD1_1st
Beta-prop_WDR3_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_WDR5
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
144688808
NCBI-ProteinID:
XP_078411898
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Position
13:91526595..91580468
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AA seq
860 aa
AA seq
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MDVAYVCEWEKRPKSNYCPSVSLVCAWSCRNLIAFSTDLKNEEEQVLSSVTLCPEVTAPV
LLPPSLLPGDKAANPRDLTYMIHILDTEHPWDVYSINSGHHEVITSLEWDQSGSRLLSAD
ADGRVKCWSMTDHLVNSWNNIVGSSVDGDPIVALSWLHNGVKLALHVEKSGASNFGEKFS
RVKFCPSLTLFGGKPMEGWIAVTISGLVTVSLLKPSGQVLTATESLSRLRSRVALADIAF
TGGGNIVVTTSDGSSSSPVQFYKVCVSVVNEKCKIDTELLPSLFMRCTTDTARKEKYPAV
THLKFLTRETSEQVLLCASSLTGSVVECWSLRKEGLPVNNIFQPISPVGDKQPSILKWRI
LSATNDMDRVTAVGLPKLPISLTSTDLKVATDTKFFPGLGLALAFHDGTIHIVHRLSLQT
MGVFYSTPSQRPTDDQTIKRQRTTASSVHFKALQLSWTSLALVGIDNHGKLSMLRISPSM
GHTLDMNTSLRHLLFLLEYCMVTGYDWWDILLHVQPNMVQNLVEKLHEEYTRQNQALQQV
LSTRIVAMKASLCKLSTSTLARACDFHAKLLLIAIGSTLKSLLRPHLLNTPDKSPGERLT
EICCKNTDTDIDKVMINLKTEEFVLDAWVLQSLQQLIQWVGDFVLYLLASLPNQGSPVRP
GFSFLRDGTSLGMLRELMVVIRIWGLLKPGCLPIYTATSDTQDSMSLLFRLLTKLWLCCR
DESHMTEPDDNLVDECCLLPSQLLVPSMDWLPVNDGIIGRLQSKQLLKLQFGKPVSVPSH
FATSQLDIFARSPGYQKMDNLRRLNLGVCPTEETKSCTRCGCNTMLKSPNKSTAVKQWEQ
RWIKNCLCGGLWRKVPISLS
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgcgtacgtctgtgagtgggagaagcggccgaagagcaattattgcccgtct
gtatccctagtgtgcgcctggtcctgcagaaacctgattgctttcagcacggacctgaag
aacgaggaggagcaagttttgtcttcagttactctgtgccccgaagtcactgctccggtt
ctcctccctccgagtctgctccctggagacaaggccgcgaatccccgagatcttacttat
atgattcacattttggacactgagcatccctgggatgtttattccatcaactcaggacac
cacgaagtgattacatctctggaatgggaccaatctggttcccgtctattatctgctgat
gctgatggtcgagtgaaatgctggagtatgactgatcacctggtaaacagctggaataac
attgtcgggagttcagtggatggggaccccattgtagccttgtcatggctacacaatggt
gtcaagttggccttgcatgtagaaaagtctggagcatccaattttggtgagaagttttct
cgggtgaaattctgcccttccttgactctgtttggagggaagccgatggaaggttggatt
gctgtaaccatcagtggtctagtgactgtgtcattactgaaacccagcggacaggtcctc
actgctacagagagtttatcacggttgagaagcagagttgccctggcagacattgcattc
actggaggtgggaacatcgtggtgaccacatcggatggcagcagctcctctcctgttcag
ttttataaagtctgcgtgagtgttgtaaatgagaaatgcaaaattgacactgagctgctt
ccatcactgttcatgcgctgtacaacagacactgctcggaaggagaagtatccagctgtc
actcacctgaagtttttaacaagagagacatctgaacaggtgttgttgtgtgcttccagc
ctgactggcagcgttgtagaatgctggtcattacgaaaggaagggttaccagtgaataat
atttttcagccaatttctcctgtgggtgacaaacagccaagcattctgaagtggaggatt
ctatctgcaaccaatgatatggatcgtgtaacagctgtgggtttacccaaacttccaatt
tcactgaccagcactgacctaaaggtggcaacagacaccaaattcttcccagggcttggc
cttgcattagcattccacgatggaactattcacattgttcacaggctttcactgcaaact
atgggagttttctacagcaccccttcccagcgaccaacagatgaccaaaccattaaacga
cagcgtacaactgcatcttctgtgcacttcaaagcattacagttgtcctggacttcattg
gcactggttggaatagacaaccatggaaagttgagtatgctgaggatctccccttcaatg
ggtcacacattagatatgaacacatcgctgcgtcacctgcttttcctactggagtactgc
atggtgactggttacgattggtgggacatcctcttgcatgtgcagcctaacatggtgcaa
aacctagtggagaaattacatgaggaatatacacgtcagaatcaggctttgcaacaggtt
ctgtctactcgaattgttgccatgaaagcatctttgtgtaagctgtcaacaagcacattg
gcaagagcctgtgatttccatgcaaagctgctgttgattgcgattggttccacacttaaa
tcactccttcgaccacatctgctcaacacgccagacaagagccctggagagcgactaact
gagatctgctgtaaaaacactgacactgatattgataaagttatgataaatctgaaaact
gaagagtttgtcctggatgcatgggtgttacagtcactgcaacagctcatacaatgggtt
ggagactttgtgctatacctcctggctagtttgcctaatcagggttctccagttcgccca
ggatttagttttctcagagatggtacctcacttggcatgctcagagagctaatggttgtg
atccgaatatggggtctccttaaacctggctgtctgccaatatacactgctacatcagac
actcaagatagcatgtccctactcttccgactactcaccaaattatggctttgctgtaga
gatgaaagccatatgactgaacctgatgacaatctggttgatgaatgttgtctgcttccc
agccaactgcttgttcccagcatggactggctaccagtgaacgatggaattattggcagg
ttacagagcaaacagctactaaagctgcagtttggaaagccagtcagtgtacccagtcac
tttgcaacctctcagcttgatatttttgcaagatcaccaggatatcagaaaatggacaac
ttaaggagacttaatttaggagtatgtccaacagaagaaactaaatcctgtaccagatgt
gggtgcaacaccatgctgaaatcgccaaacaagtcaactgcagttaaacagtgggaacag
cggtggattaagaactgtctgtgtggggggctttggcgcaaagtccccattagtctatcc
taa
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