Cetorhinus maximus (basking shark): 144689686
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Entry
144689686 CDS
T12026
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cmam Cetorhinus maximus (basking shark)
Pathway
cmam04517
IgSF CAM signaling
cmam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
144689686 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
144689686 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cmam04812
]
144689686 (sptbn1)
Cytoskeleton proteins [BR:
cmam04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
144689686 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
144689686 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
144689686
NCBI-ProteinID:
XP_078413107
LinkDB
All DBs
Position
14:complement(58630160..58908442)
Genome browser
AA seq
2360 aa
AA seq
DB search
MTAIATDYDNIDIQQQYSDVNNRWDVEEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVESEDNKEKKSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNAVIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDVSVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDYAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPSKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAV
VAVAKELEAENYHDIKRITARKENVYRLWEYLLELLRARRHRLEMNLNLQKIFQEMLYIM
DWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKVVNASAQKFASEGEGY
KPCDPQVIRDRVTHLEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSADYGKDLTSVIRLLSKHKAFEDEMSGRRGPLQQTIKEGEAMVAEEHFGSEKIKERIKD
IQEQWAHLEQLSAVQKKRLEEAANVHQFKADGDDIDVWMLDILRIVSSNDVGHDEYSTQA
LVKKHKDVGEEVASYRQIIDALHEQGQSLPDEYYKSPEIEGRLTDIEERYKELAELARLR
KQALQDALSQYKMFSEADACELWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRIAVVNQIARQLIHSGHPSEKEIKAQQDKLNTRWSQFRQLVDQKKDALTSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLTAIEAKLDDLQKEAER
LAAEHPDQEHAIMSRLAEINDVWEEMKYTLKNREESLGEANKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLAEGEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNHLSQSHSYQLFLRDTKQAEGFLNNQEYVLAHTEMPTTL
EAAEAAIKKQEDFMTTMDANEDKINGVVETGRRLVSDGNIYSDKIQEKVDSIDERHKKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWISEKMLTAQDMSYDEARNLHSKWQKHQAFMA
ELASNKEWLDKIDKEGMQLTAEKPETEVVVKEKLTALHHLWEELESTTQAKAQRLFDANK
AELFTQSCADLDKWLHNLEGQLQSDDYGKDLTSVSILLKKQQMLENQIEVRKKEVEELKG
QAKILSQEGKDIDEVDSKRTIVEKRFLQLLEPLHERKNYLLASKEIHQFNRDLEDEILWA
EERMPLATSTDHGHNLQTVQMLIKKNQTLQKEIQGHKPRIDDIFERSQSMITADSPSAKA
IQQRLSDLRELWKLLSEETEKRHNRLVESHKAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVMMLKKHQILELAVEDYAETVHQLSKTSRALVADGHPESERISMRQSQVDKLYAG
LKDLAEERRGKLDERYRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDSVNRMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVEALQRMHTTFEHDIQALGTQVRQ
LQEDAARLQAAYAGDKADDIQKREAEVLEAWKTLLDACEARRAKLFDTGDKFRFFSMVRD
LMLWMEDVIRQIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQFARDAGVAEAWLLGQEPYLSS
RELGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRRQEEEERKRQPSP
QPTPQPSDESESPQQEGTREGEHISQNGLPSDQESPRVSETIETNEMVNGATEQRTSSKE
PSPTASPTSDRKTKTSPLQSQSATLPVKSQETPSAQMEGFLHRKHEWEAHNKKASSRSWH
NVYCVINNQEMGFYKDAKNASSGITYHGEVPISLKEALCEVAVDYKKKKHVFKLKLSDGN
EYLFQAKDDEEMNSWIQAITSAVSTDKSEPIPSSQSTPAASRAQTLPASVVLAGESSPGR
REKDKEKDKEKRFSLFGKKK
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaatagcaacagactacgacaacattgatattcagcagcagtatagtgatgtc
aacaatcgttgggatgtggaagaatgggataacgaaaacagctctgccaggctgtttgaa
aggtcccgtattaaagccttggcagatgagcgtgaagctgttcaaaagaagactttcaca
aaatgggtaaactcacacttggcacgagtatcttgcagaatcacagatttgtacacagac
ctacgcgatggccggatgctgatcaaactactcgaggtgttgtctggagaaagacttcca
aaaccaacaaaaggacgaatgcgaatccattgtcttgaaaatgttgacaaagcccttcag
ttccttaaagagcaaagagtacatttagaaaatatgggatcccatgatattgtggatggc
aaccatcgactgactctcggtttaatttggaccatcattctccgattccagatccaagat
atcagcgttgaatcagaagacaacaaggaaaagaaatctgcaaaagatgccttgctgttg
tggtgccaaatgaaaacagcaggctatcccaatgtcaacattcacaactttaccaccagc
tggagagatggcatggcattcaatgctgttatacacaagcataggccggacctgattgac
tttgacaaacttaagaagtctaatgcccactacaatctccagaatgctttcaaccttgca
gagcaacaccttgggcttaccaagctgctggatcctgaagatgtcagtgttgatcaccct
gatgagaagtcaattattacttatgtggtgacatactaccattacttctccaaaatgaag
gccctggctgtggaaggaaaacgtattggaaaggtacttgactatgcaattgagactgaa
aaaatgatagaaaaatacgagtccctggcatctgacctgctggagtggattgagcagact
atcatcatcctgaacaatcgtaaatttgccaactcactggttggtgttcagcagcagcta
caagcatttaacacatatcgcacagtagaaaaaccatcaaagtttacagaaaaaggaaat
cttgaagtattgcttttcaccattcaaagcaaaatgagagctaacaatcagaaagtatac
atgccaagagaaggcaaactcatctcagatatcaacaaggcctgggaaagactggaaaaa
gctgaacatgagcgagaactggcattaagaactgagctgatcaggcaagaaaagctggaa
caacttgcacgtcgatttgatcgtaaagctgctatgagagaaacctggctaagtgaaaac
cagcgccttgtttcccaggataattttggttttgatctcccggctgtcgaagctgctact
aagaaacatgaagctattgaaacagacattgctgcatatgaagagcgagtacaagcagtt
gtggctgtggctaaggaacttgaagcagagaactaccatgacatcaaacgcatcacagca
aggaaagagaatgtctataggctgtgggaatacttactggaattattgcgagctcgtcgt
catcgtttagaaatgaatcttaacttgcaaaagatttttcaggaaatgctatatattatg
gactggatggatgaaatgaaggttctactgttgtcacaagactatgggaagcatttactt
ggtgttgaagatctcctacagaaacatgcactggttgaagctgacattgctattcaggct
gacagagtgaaagttgtcaatgcttctgctcaaaaatttgcttctgaaggagaaggttat
aaaccatgtgacccacaggttattcgtgatcgtgtgactcacctggaattctgttaccaa
gagctttgtcagctggcagctgaacgaagggctcgtttggaagagtcccgacgcctctgg
aagttcttttgggaaatggcagaggaagaaggctggatccgggagaaagaacagatactt
tcatcagctgactatggcaaagatctgactagcgtgattcgccttctcagtaaacacaag
gcatttgaggatgaaatgagtggacggagaggacctcttcaacaaaccataaaagaaggt
gaagcaatggtagctgaggagcactttggatcagagaagattaaggagagaattaaagac
attcaggagcaatgggcccaccttgagcagctgtctgcagttcagaaaaagcgattagag
gaagctgctaatgttcaccagtttaaggctgatggtgatgatattgatgtttggatgtta
gatattctgaggattgtctccagtaatgatgttggtcatgatgaatactccactcaagcc
ttagtgaagaaacacaaagatgttggtgaggaggttgctagctacagacaaatcattgat
gcactacatgaacagggacaaagtttgcctgatgagtattataagtcacccgaaatagaa
gggagattaactgacattgaggaacgttacaaggagttagcagaactggcacggcttcgt
aagcaagccctccaggatgcactgtcacagtacaagatgttcagtgaagcagatgcttgt
gaattatggattgatgaaaaggagcagtggctgaacagcatggagatcccagaaaaactt
gaagatctagaggtcatccagcataggtttgaaagtttggagccagaaatgaacaaccag
gcctctcgtatcgcagtggtgaaccagatagctcgtcagttgatccacagcgggcatcct
agtgaaaaggagatcaaagcacagcaagataagctaaatacaaggtggagtcaattccgt
caactagtggaccaaaagaaagatgcactcacttctgcactcagcattcagaactaccac
cttgaatgcaatgaaacaaagtcttggattagggaaaagaccaaagtcattgaatccaca
caagatctgggcaacgatcttgctggtgtcatggccctccaaaggaaattaactggaatg
gaacgtgatttgacagctattgaagctaaactagatgacctgcagaaagaagctgaaaga
cttgctgctgaacatcctgaccaggaacatgctataatgagccgtcttgcagaaatcaat
gatgtctgggaagaaatgaaatatactttgaagaaccgagaagaatcacttggtgaagca
aacaagcttcagcaattcctgcgcgatttggatgacttccaatcctggctatcaagaacc
caaactgcaattgcctctgaagatatgcccaacaccctggcagaaggggagaagctgctt
acccagcatgaaaacatcaaaaatgaaattaataactatgaagaagactaccagaaaatg
cgtgacatgggtgaaatggtaacgcaggggcaaacagatgcacaatatatgttcctacgc
cagcgtctgcaggctttggatactggatggaatgagctgcacaagatgtgggagaacaga
cagaatcacctgtcccaatctcattcataccaacttttcttaagagacacaaagcaagca
gaagggttcctcaacaaccaggagtatgtgttggcacacactgaaatgcccaccacacta
gaggctgctgaagctgccattaagaagcaggaagacttcatgactaccatggatgctaat
gaagataagatcaatggagtggtagagacaggcaggagactagtcagcgatggcaatatt
tattctgacaaaatccaggagaaagttgactcaattgatgaaaggcataagaagaaccgt
gaggctgccagcgaactacttatgcgccttaaggataatagagacctacagaagtttctc
caagactgccaggaattgtccctttggatcagtgagaagatgctcactgctcaggacatg
tcctatgatgaagccagaaatttgcacagcaaatggcagaagcatcaggcttttatggca
gagcttgcatcaaacaaagaatggctggataaaattgataaggagggaatgcagctaact
gcagagaagccagagactgaggtggtcgtgaaggaaaagctgacagccctacaccatttg
tgggaagaactagaatctactacacaggccaaagctcagcgtctgttcgatgccaacaaa
gcagagcttttcacccagagctgtgccgatttagacaaatggctgcataacctggaaggt
cagctccagtctgatgattatggcaaggaccttaccagtgtctctattctactcaagaaa
caacagatgttagaaaatcagatcgaagtgcgaaagaaggaagtggaggaactgaaaggt
caggccaagattttgagccaagaaggcaaagatattgatgaggtggatagcaagcgcacc
atagttgaaaaaagatttttgcagctactggaaccactacatgaaaggaaaaactacttg
ttggcatctaaagaaatacatcaattcaacagagatctggaggatgagattttgtgggct
gaagaacgcatgcctcttgcaacatccactgaccatggtcacaacctccagactgtacag
atgctgatcaagaaaaaccagactcttcaaaaggaaattcaaggccataaaccacgtatt
gatgatatatttgagagaagccaaagtatgataactgctgattccccaagtgctaaggct
attcagcagagattatcagatctacgagaactttggaaattattgtctgaagaaacagag
aagcggcacaatcgcttggtggagtctcacaaagcccaacagtattattttgatgctgca
gaggctgaagcttggatgagtgaacaagaattgtacatgatgtcggaagagaaagcgaag
gatgagcagagtgcagtaatgatgttgaaaaaacatcagattttggagttggcagtggaa
gattatgctgagactgtgcatcaactctcaaagacgagccgagctctggtggcagatggg
cacccagagagtgaacgtatcagcatgcgccagtcccaggtggacaaactttatgctggc
ctgaaagacttggctgaggagagaagagggaaactggatgagaggtaccgccttttccaa
ctaaacagggaggtggacgatttggagcaatggatagccgaacgtgaggtggtcgctgga
tcacatgaacttgggcaggactatgagcatgttacgatgctgcaagagaggttccgtgaa
tttgcccgtgatactggtaatattggtcaggagcgagttgacagtgtgaaccgtatggct
gatgagctgatcaattcgggacattctgatgctgctacaattgctgaatggaaagatgga
ctcaatgaagcttgggcagatcttcttgagcttattgacaccagaacacagattctggca
gcttcttacgaattgcacaaattttaccacgatgctaaggagatccttggacgaattcaa
gacaagcacaagaagcttccagaggaactaggacgagatcagaatactgtggaagcattg
cagagaatgcatacaacatttgaacatgacattcaagctcttggtactcaggtaaggcag
ctgcaggaggacgctgctcgtctccaggctgcttatgctggtgacaaggctgatgacatt
cagaaacgcgaagcagaagtattggaggcatggaagacacttcttgatgcatgtgaggct
cggagggcaaagctttttgatactggtgacaagttccgcttctttagcatggtgcgtgat
ctcatgctttggatggaagatgttattcggcaaattgagacccaagagaaaccaagagat
gtttcatcagtagaattgctaatgaacaatcaccaaggcatcaaggctgaaattgatgcc
cggaatgacagtttcacaacgtgcattgaacttgggaaatctctcctggcaagaaagcac
tatgcatctgaagagattaaggagaagttgttgcaactaacagataagaggaaagaaatg
attgacaagtgggaggacagatgggagtggctcagactagtattggaagtacaccagttt
gctagagatgcaggtgtggcagaagcctggcttttaggccaagagccatacctgtccagt
cgagaattgggtcagagtgtggatgaggtggagaaactgattaagagacatgaggcattt
gagaaatcggcagctacgtgggatgaaaggttttcagcgttggagagactgacaacactg
gagttgcttgaagtacgtaggaggcaggaagaggaggagaggaagagacaaccatcacca
cagccaaccccgcagccttctgatgagtctgaatcaccacaacaggaaggcactagagaa
ggagaacacatttctcagaatggattaccatcagaccaggagtccccacgggtgtctgag
acaattgaaacaaatgagatggtgaatggcgccactgaacagagaaccagttccaaagag
cccagtcctacagcttcaccaacttcagatcgtaaaaccaagacctcacctttgcagtcc
caatctgctactttacctgtcaagtcacaagaaactccatcagcacagatggagggcttc
ctgcatcgcaagcacgaatgggaagcacacaataagaaagcatcaagcagatcatggcac
aatgtgtattgtgtgataaacaaccaggagatgggcttctataaagatgcaaagaatgct
agttcaggtatcacatatcatggggaagtcccaatcagcctgaaggaggcactgtgtgaa
gtagctgttgactataagaagaagaagcatgtctttaaactaaagctgagcgatggcaat
gaatatctcttccaagccaaagatgatgaggaaatgaacagctggattcaagctatcact
tcagctgtgtctacagataagagcgagccaattccaagcagccagagcaccccagcagct
agccgtgcacagaccctgccagccagtgtcgtgttggctggtgaatctagccctggcaga
cgagagaaagataaagagaaagacaaagagaagagattcagcctgtttggcaagaagaag
tag
DBGET
integrated database retrieval system
