Cetorhinus maximus (basking shark): 144692175
Help
Entry
144692175 CDS
T12026
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X3
KO
K13210
far upstream element-binding protein
Organism
cmam
Cetorhinus maximus (basking shark)
Brite
KEGG Orthology (KO) [BR:
cmam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmam03019
]
144692175 (fubp1)
03041 Spliceosome [BR:
cmam03041
]
144692175 (fubp1)
Messenger RNA biogenesis [BR:
cmam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
144692175 (fubp1)
Spliceosome [BR:
cmam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
144692175 (fubp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_KHD4_2nd
KH_PARP10_1st
CG7065_mid
Motif
Other DBs
NCBI-GeneID:
144692175
NCBI-ProteinID:
XP_078416830
LinkDB
All DBs
Position
17:12108949..12146278
Genome browser
AA seq
696 aa
AA seq
DB search
MAEYSAVAPPSALSGGGGGGGGGGGGGGAGGGGAGGGGAGGGFKNDAFADALQRARQIAA
KIGGDTGTTINTSDYGYGGQKRPLEDGDQPDTKKVAQNDPFGAQLAAMHQQRSIATEEYK
VPDGMVGFIIGRGGEQISRIQQESGCKVQIAPDSGGLPERSCMLTGSPDSILAAKRLLDQ
IVERGRIGPGTHHGDGPGTSVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGP
QPTGSDKPLRITGDPFKVQQAKDMVMDLIRDRDQGGFREQRNEYGSRLGGTNEALDVPVP
RFAVGIVIGRSGEMIKKIQNDAGVRIQFKPDDGTTPERIAQILGPPDRCQHAAEILTDLL
RSVEAGMPPGPGGPGPGRGRGRGQGNWNMGPPGGLQEFTFTVPSSKTGIIIGKGGETVKA
ISQQSGARIELQRNPPPNADPNFKMFIIRGSTQQIDYARQLIEEKIGAPTGPPGPPGPHG
PHGPHLPPGPHGPPGPPGPGTPMGPYNPGPYNPGPPGPPQHGPPAPYAPQGWGNAYQPWQ
QQGQPDPNKAGDANTAAWAAYYAQYYQQQAQQPPAASSTGQGNTPNSAQAGDPNQPNAAQ
TPQTDYTKAWEEYYKKLGQQGQPQGAQQDYTKAWEEYYKKQSQAAQASSTAAQPGGQPDY
SAAWAEYYRQQAAYYSQTNSQGIPQHPPAQQPPQAQ
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatactcagcagtggcgccgcccagcgcgttaagcggtggcggcggcggagga
ggcggtggtggcggcggcggcggcgcgggaggaggtggagcaggtggtggcggtgccggc
ggcggctttaagaacgacgcattcgctgacgcccttcagcgggcgaggcagatcgcagca
aaaattggaggagatacaggaacaacaataaatacgtctgactatggatatggtggacag
aaaaggcccctggaagatggagatcaaccagatacgaagaaagttgcgcagaatgaccca
tttggagcacagctagctgcaatgcatcaacagaggtcaatcgccacagaggagtacaaa
gtacccgacggtatggttggatttataattggccgaggtggggaacagatctcgcgcata
cagcaagagtctgggtgcaaagtacagattgcgcctgacagtggcggtttaccagaaaga
tcctgcatgttgacaggaagtcctgattccattctagctgcaaagaggctacttgatcaa
atagttgaaagaggccgaattggtccaggtacacatcatggagatggaccaggtacttca
gtgcaggaaatcatgattcctgcaagcaaggctggacttgttattgggaaaggtggagaa
acaatcaagcaattgcaggaacgtgcaggagtcaagatggtgatgattcaagatggacct
cagccaacaggatcagacaaacccctccgcataacaggagatccattcaaagtacagcaa
gccaaggacatggtgatggatctaattcgtgaccgagaccaaggtggttttagggagcag
cgtaatgagtatggatcccgtttgggaggaacaaacgaagcattggatgtccctgtacct
cgctttgctgttggtattgtaatagggagaagtggagaaatgatcaagaagatacagaac
gatgctggtgtgaggattcagttcaagccagatgacgggacgacgccagaaagaatagct
cagatcctgggccctccagacagatgtcagcatgctgcagaaatacttacagacctccta
cggagtgtggaggctggcatgcctccgggtcctggtggtcctggacctggcagaggaaga
gggagaggccaagggaactggaatatgggccctcctggtggacttcaagagttcactttc
acagtacccagcagcaagactggcataatcattggcaaaggtggtgagactgtaaaggca
attagccaacagtcaggagcacggatagagcttcagagaaacccacctccaaatgctgat
cccaattttaaaatgtttattattcgtggatcaactcaacagattgattatgctagacaa
cttattgaagagaagattggggctcctactggtcctcctgggccgcctggtccccatggt
cctcatggaccccacttgcctcctggccctcatgggccccctggtcctccaggccctggg
actccaatgggaccctataatccagggccctataatccagggccacctggtcctcctcaa
catggtccaccagcaccgtatgctccacaaggatgggggaatgcctatcagccctggcag
caacagggtcaaccagatccaaataaagctggagatgcaaatacagctgcatgggcagca
tattacgctcagtattatcagcaacaagcacagcagccacctgcagcttcaagcactggt
cagggcaataccccaaattctgcacaggcaggtgatccaaaccaacccaacgcagcccag
actcctcagaccgattataccaaagcctgggaagaatattacaagaaattagggcaacag
ggacaaccacaaggagcccaacaggattacaccaaagcttgggaagaatactacaagaaa
caaagtcaggcagctcaagcttctagtacagcagctcagccaggcgggcaaccagactac
agtgctgcgtgggctgagtattacaggcagcaagcggcttactacagtcagacaaactcc
cagggaattccacagcatccgccagcacagcaacccccacaggcccagtaa
DBGET
integrated database retrieval system
