Cetorhinus maximus (basking shark): 144693930
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Entry
144693930 CDS
T12026
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
cmam Cetorhinus maximus (basking shark)
Pathway
cmam03030
DNA replication
cmam03410
Base excision repair
cmam03420
Nucleotide excision repair
cmam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
144693930 (rfc4)
03410 Base excision repair
144693930 (rfc4)
03420 Nucleotide excision repair
144693930 (rfc4)
03430 Mismatch repair
144693930 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmam03032
]
144693930 (rfc4)
03036 Chromosome and associated proteins [BR:
cmam03036
]
144693930 (rfc4)
03400 DNA repair and recombination proteins [BR:
cmam03400
]
144693930 (rfc4)
DNA replication proteins [BR:
cmam03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
144693930 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
144693930 (rfc4)
Chromosome and associated proteins [BR:
cmam03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
144693930 (rfc4)
DNA repair and recombination proteins [BR:
cmam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
144693930 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
144693930 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_lid_RFC1
AAA_11
AAA_16
AAA_22
SLFN-g3_helicase
AAA_30
Mg_chelatase
AAA_28
DUF815
AAA_14
AAA_24
RuvB_N
ResIII
AAA_19
AAA_5
Kinesin
AAA_7
Gp44_lid
Motif
Other DBs
NCBI-GeneID:
144693930
NCBI-ProteinID:
XP_078420285
LinkDB
All DBs
Position
19:complement(75043409..75067286)
Genome browser
AA seq
372 aa
AA seq
DB search
MQAFLKGAGVIGVKPAKEKAAAGTSGENKKQKSVPWVEKYRPKCVSEVAFQEEVVAVLKK
SLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELYRKRILELNASDERGIQVVREKVK
NFSQLTVAGSRSDGKTAPPFKIVILDEADSMTNAAQAALRRTMERESKTTRFCLICNYIS
RIIEPLTSRCSKFRFKPLTDSIQEKRLLDICEKENVHYSNETIAILINVSEGDLRKAITY
LQCATRLTGGKDITEQVISEIAGVVPSEVIDSLLAACHSSSFEKLETVVKCFCLSTTVFF
RQNLINDGYAATQLINQLHDVIIDKEDLNDQQKSTITLKLAEVDKCLADGADEYLQMIGL
SAVIMQQLTQSV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcttttttaaaaggagctggagttatcggcgttaaaccagcaaaagaaaaggcc
gcagcaggaaccagtggagagaacaaaaaacaaaaatcagttccatgggtggagaaatat
cgcccaaaatgtgtgtccgaagtggcgtttcaggaggaagttgtggctgtgctaaagaag
tcacttgaaggtgctgatcttcccaacctgcttttttatggacctcctggcacaggaaaa
acttccacaattttggctgcagcaagagaactctttgggcctgaattataccgcaagaga
atccttgagctgaatgcctctgatgaacgtggtattcaggttgtacgagaaaaggtgaaa
aatttttcacaattgactgtagctggatctcgctcagatggaaaaactgctccaccgttt
aagattgtcatcttagatgaagcagactctatgacaaatgctgcacaggctgctcttcgt
cgaacaatggaaagagagtcaaaaaccacacgtttctgtctcatctgcaactacatcagc
aggataattgaaccactgacatctcgatgttctaagttccgttttaaacctttgacagac
agtatacaagagaaaagattgctggatatctgtgagaaggagaatgtgcactacagcaat
gaaacaattgctattcttatcaatgtatccgaaggagacctgagaaaggcaataacgtac
ctgcagtgtgcaacaagacttacaggagggaaagacatcacagaacaagtcatcagtgaa
attgctggggttgtgccatcagaagtcattgacagccttttagctgcatgccacagcagc
tcatttgaaaaactggaaactgtagtaaaatgcttctgtttatccaccactgttttcttc
cgtcagaatttgattaatgacggttatgctgcaacacagttaatcaaccagctacatgat
gtcattatcgataaagaagatcttaacgatcaacagaagtcaacaatcacgctaaaactg
gcagaagttgacaagtgtttagccgatggtgctgatgagtacctgcagatgatcggtctt
tctgctgttattatgcagcagcttacacagagcgtttaa
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integrated database retrieval system
