Cetorhinus maximus (basking shark): 144694948
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Entry
144694948 CDS
T12026
Symbol
tia1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cmam
Cetorhinus maximus (basking shark)
Brite
KEGG Orthology (KO) [BR:
cmam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmam03019
]
144694948 (tia1)
03041 Spliceosome [BR:
cmam03041
]
144694948 (tia1)
Messenger RNA biogenesis [BR:
cmam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
144694948 (tia1)
Spliceosome [BR:
cmam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
144694948 (tia1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Nup35_RRM_2
Calcipressin
NosL
Motif
Other DBs
NCBI-GeneID:
144694948
NCBI-ProteinID:
XP_078421875
LinkDB
All DBs
Position
20:complement(21620642..21664207)
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AA seq
407 aa
AA seq
DB search
MMEDDGQPRTLYVGNLSRDVTEALILQLFSQIGPCKSCKMIVETGNDPYCFVEFYEHRHA
AAALAAMNGRKIMGKVEVSQLAVMSFVPHPASSVSQLHTATHHKTEVKVNWATTPSSQKK
DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDLATGKSKGYGFVSFYNKWDA
ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTSEPNTKQLSYEEVVNQSSPSNCTVYCGG
IAVGLTEQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSSHESAAHAIVSVNGTTIEGHIVK
CYWGKETPDGMGQFQQQNQMGYAQPWSQFGQWYGNTQQFGQYMPNGWQMPPYGVYGQAWN
QQGFRMDQTPSTAAWMGANYGVQPAQGQSPSVITNQAGFGMAGYQTQ
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacgacgggcagccgagaaccctctatgtgggaaatctctccagagatgtg
acggaagccctcattcttcaacttttcagtcagattggaccatgcaaaagctgtaagatg
attgttgagactggcaatgatccatattgctttgtggagttctacgagcaccgacatgca
gcagcagcattagcagctatgaatgggcggaaaattatgggtaaggttgaggtgtcacag
ttagctgtaatgtcctttgtcccacatcctgcttcttcagtctcacaattgcatacagct
acacaccacaaaacagaagtcaaagtgaactgggcaacaactccaagtagccagaagaaa
gacacgagtaatcatttccatgtatttgttggcgacttgagtccagaaatcactacagaa
gatataaaagcagcttttgcaccatttggaagaatatccgatgctagagtggtcaaagat
ttggcgacgggaaaatccaaagggtacggctttgtgtccttctacaataagtgggacgct
gaaaatgccattcaacagatgggcgggcagtggcttggaggaaggcagatccgaacaaat
tgggcaacccgcaagcctcctgccccaaagagtacatcagagccaaataccaaacagctc
tcctatgaggaagttgtcaatcaatccagccccagcaactgtactgtctactgcggtggc
atagcggttggacttacagagcaacttatgcgccagacattttcaccctttggacagatc
atggagatcagagtgtttcctgagaaaggatattcatttgtacgtttttcatcacatgaa
agtgcagcacatgctattgtgtcagtcaatggaaccaccatagaaggacacattgtcaaa
tgctactgggggaaagaaacgcctgacggaatgggtcagtttcaacagcaaaatcagatg
ggttatgctcagccttggagccagtttggccagtggtatggaaatactcaacaattcggc
cagtatatgcctaatggctggcaaatgccaccttatggagtttatgggcaagcttggaac
caacaaggattcagaatggatcagacaccgtccactgctgcatggatgggtgctaactat
ggagtccagcctgcacaaggtcaaagtcccagtgtgataaccaaccaagcaggatttggc
atggcaggctaccagacccagtga
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