Croceicoccus marinus: A9D14_02170
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Entry
A9D14_02170 CDS
T04890
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cman
Croceicoccus marinus
Pathway
cman03030
DNA replication
cman03430
Mismatch repair
cman03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A9D14_02170
03430 Mismatch repair
A9D14_02170
03440 Homologous recombination
A9D14_02170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cman03032
]
A9D14_02170
03400 DNA repair and recombination proteins [BR:
cman03400
]
A9D14_02170
Enzymes [BR:
cman01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A9D14_02170
DNA replication proteins [BR:
cman03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A9D14_02170
DNA repair and recombination proteins [BR:
cman03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A9D14_02170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
HHH_3
COE1_HLH
Motif
Other DBs
NCBI-ProteinID:
ARU15202
UniProt:
A0A1Z1F8W7
LinkDB
All DBs
Position
428886..432422
Genome browser
AA seq
1178 aa
AA seq
DB search
MASSRPTLARYIPLRVLSSYSMLEGAIDPKKLAKLAKDRGFPAIAICDRNGLYGSIAFAG
ACKDVGVQPIIGALLGVARPDSESQNGDPSVDWLALYAQDEQGYDNLCHLVSKAHLERPL
HLEPHVTLDDLAGRTDGLICLTGAGEGALARLFAHGQNSAAKRYADALAPHFPGRLYVEI
ARSGAANERESEEALIDLAYARDLPLVATNPALFDEAGFHAAHDAMLCIANSTHIDTEDR
PRAPRDAWVKPSEHMAELFSDLPEGLTNSLVIAQRCAVAPPYRKPILPSLAGDFEGEARA
LAEDARAGLAKRLEAYEELTDEQRREYEERLDFEIGIITQMGFPGYFLIVADFIKWAKDN
GIPVGPGRGSGAGSAVAWALTITDLDPLRLGLLFERFLNPERVSMPDFDIDFCETRRGEV
IRYVQAKYGHDHVAQIITFGKLKARAVLRDCGRILQMPYMQVDRLTKMVPNHPTDPWTLR
RTLDGAADFHGEYKRDGDVKRLVDLAMQLEGLPRNSSTHAAGVVIGDRPLSQLVPLYRDP
RSDMPVTQFDMKHVETSGLVKFDFLGLKTLSVLRKAVDLLGRRGISVDLDGLAWDDKGVF
DLLKRGDTVGVFQLESEGMRRTLSAVKPTKFEDIIALVSLYRPGPMDNIPLFGQRKNGLA
EIEYPHPKLEGILAETYGIFVYQEQVMQAAQILAGYSLGDADLLRRAMGKKVQAEMDQQR
SRFVEGCKAVSGIEAKKANELFDLIDKFAGYGFNKSHAAAYALLAYQTAWLKAHYPHEFY
AAAMCFDMHQSEKLSIFVDDMRRAGIALAGPCINHSEAEYTVEPTEEGHQVRYALAGLRN
VGEKAMDAIVAEREARGRFESLKDLFERLPAGSMNRRQLEALAAAGALDALDANRAKITA
NAELLLAVTDAAVREKASGQAALFGGEDHAQADLRLTECDPWPRKEQMEKERENFGFYFA
AHPVSQWRAVASANGARSHASLIEGGVVESPAEPVRNGQRGASRSSAVMAALVESVNKRK
TKRGNDFVMADFSDQTGNFSASCFEEALVEPFQKWAAAGECVLLNVELDRPNPDEPPRIT
VRGARPLSEVTGSARMELTLTVASEAALPELALALPADAKANGEVVATLLLGEGRHARVL
LGRNFALDGELTDRISEIAGVSNVALKARAVPQMKLVA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcgcgtccgactctagcccgctatatcccgctgcgcgtcctttccagctac
tcgatgctggaaggggcgatagacccgaagaagctggccaagctggccaaggaccgcggc
tttcccgccatcgcgatctgcgaccgcaacgggctctacggctcgatcgcgttcgcgggg
gcatgcaaggatgtcggcgtgcagccgatcatcggcgcgctgctgggcgtcgcgcggcct
gactctgagagccagaacggcgatccgtcggtcgactggctggcgctctatgctcaggac
gagcagggctatgacaatctgtgccatctggtgtcgaaggcgcatctcgaacgcccgctg
catctggaaccgcatgtcacgctggacgatctggcgggccgcaccgacgggctgatctgc
ctgaccggggcgggcgaaggcgctttggcccggttgttcgcgcatggccagaacagcgcc
gcgaagcgctatgccgatgcgctggccccgcattttcccggccgcctctatgtcgagatc
gcgcgcagcggggcggcgaacgagcgtgagagcgaggaagcgctgatcgatcttgcctat
gcgcgcgacctgccgctggtggcgaccaatcccgccctgttcgacgaggcgggcttccac
gccgcgcatgacgccatgctgtgcatcgccaacagcacccatatcgataccgaggaccgc
ccccgcgcgccccgcgacgcatgggtcaagccgtccgagcacatggcggagctgttctcc
gacctgcccgaaggcctgaccaattcgctggtgatcgcgcagcgctgcgcggtcgcgccg
ccctatcgcaagccgatcctgcccagccttgccggcgatttcgagggcgaggcgagggcg
ctggccgaggatgcgcgcgccggtctggcgaagcggctggaggcctatgaagagctgacc
gacgaacagcgccgcgaatatgaggagcgtctggatttcgagatcgggatcatcacccag
atgggctttcccggctatttcctgatcgttgccgacttcatcaaatgggccaaggacaat
ggcattccggtcgggccggggcgcggttcgggcgcaggcagcgcggtggcctgggcgctg
accatcaccgacctcgacccgctgcggctggggctgctgttcgaacgcttcctcaacccc
gaacgcgtgtcgatgcccgacttcgacatcgacttctgcgaaacccgccggggcgaggtg
atccgctatgtgcaggcgaaatacggccacgaccacgtcgcgcagatcatcaccttcggc
aagctgaaggcccgcgcggtgctgcgcgactgcgggcgcatcctgcagatgccctatatg
caggtcgaccgcctgaccaagatggtgcccaaccatcccaccgatccctggacactgcgc
cgcacgctggacggcgcggccgatttccacggtgaatacaagcgcgacggcgacgtgaag
cggctggttgacctcgccatgcagcttgagggcctgccgcgcaattcatcgacccatgct
gcgggcgtggtgatcggcgaccggccgctgtcgcagctggtcccgctctaccgcgatccg
cgttcggacatgccggtgacgcagttcgacatgaagcatgtcgagacgagcgggctggtg
aagttcgactttcttggcctcaaaaccctgtcggtattgcgcaaggcggtcgacctgttg
gggcggcgcgggatttcggtcgatctcgacgggctggcgtgggacgacaagggcgtgttc
gacctcctcaagcgaggcgacacggtgggcgtgttccagctggaatcggaaggcatgcgc
cgcacgctctccgccgtgaagcccaccaagttcgaggacatcatcgccctcgtctcgctg
tatcgtcccggcccgatggacaatatcccgctgttcggacagcgcaagaacggccttgcc
gagatcgaatatccgcacccaaagctggaaggcatactggccgagacctacggcatcttc
gtctatcaggaacaggtgatgcaggccgcgcagatcctggcgggatattcgctgggcgac
gccgaccttctgcgccgcgcaatgggcaagaaggtgcaggccgagatggaccagcagcgc
agccgctttgtcgagggctgcaaggcggtgtcgggcatcgaggcgaagaaggcgaacgag
ctgttcgacttgatcgacaagttcgcaggatacggcttcaacaagtcgcacgcggccgcc
tatgcgctgctggcctatcagaccgcgtggctgaaggcgcattacccccatgaattctat
gccgcggcgatgtgctttgacatgcaccagtcggaaaagctgtcgatcttcgtcgacgac
atgcgccgggcgggcatcgcgctggccggtccgtgcatcaaccatagcgaggcggaatac
acggtcgagccgaccgaggagggccaccaggtccgctatgcgctggcgggcctgcgcaat
gtcggcgaaaaggcgatggacgccatcgtcgcggaacgcgaggcacgcgggcggttcgaa
agcctcaaggatttgttcgaacgcctgcccgccggatcgatgaaccgccgccagctggag
gcgctggccgcggcaggcgcgctggacgcgctggatgccaatcgcgcgaaaatcaccgcc
aatgccgaactgcttttggccgtcaccgacgccgcggtgcgcgaaaaggccagtgggcag
gccgcgctgttcggcggcgaggatcatgcacaggccgatttgcgcctgaccgaatgcgat
ccctggccgcgcaaggagcagatggagaaggagcgcgagaatttcggcttctacttcgcc
gcgcatcccgtctcgcaatggcgcgcggtcgccagtgccaatggcgcgcgcagccatgcc
agcctgatcgaggggggcgtggtggagagccctgcggaacccgtgcgcaacggccagcgg
ggcgcaagtcggtccagcgcggtgatggcggcgctggtggaaagcgtgaacaagcgcaag
accaagcgcggcaatgatttcgtgatggccgatttctcggaccagaccggcaatttctcc
gccagctgtttcgaggaggcgctggtcgagccgttccagaaatgggcggcggcgggcgaa
tgcgtgctgctgaatgtcgagcttgaccgccccaatccggacgagccgccccgcatcacc
gtgcgcggcgcgcggcccctgtccgaagtgaccggcagcgcgcgcatggaactgacgctg
accgtggcgagcgaggcggccctgcccgagcttgcgctggcgctgcccgccgacgccaag
gcgaacggagaggtggtggcgacgctgctgctgggcgaggggcgtcatgcccgcgtgctg
ctgggccgcaatttcgcgctggacggggaactcaccgaccgcatcagcgagattgcgggc
gtctccaacgtggcgctgaaggcgcgcgcggtgccgcagatgaagctggtcgcctga
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