Croceicoccus marinus: A9D14_04445
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Entry
A9D14_04445 CDS
T04890
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cman
Croceicoccus marinus
Pathway
cman03420
Nucleotide excision repair
cman03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A9D14_04445
03430 Mismatch repair
A9D14_04445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cman03400
]
A9D14_04445
Enzymes [BR:
cman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A9D14_04445
DNA repair and recombination proteins [BR:
cman03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A9D14_04445
MMR (mismatch excision repair)
Other MMR factors
A9D14_04445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
DUF3553
DUF3253
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ARU15566
UniProt:
A0A1Z1FA09
LinkDB
All DBs
Position
complement(913783..916107)
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AA seq
774 aa
AA seq
DB search
MSDSALTPPRSALTHAREPWLESLNAPQREAVLTTEGPVLMLAGAGTGKTAALTARLAHL
VASRRAWPSEILCVTFTNKAAREMRERVGGLIGPAVEGMPWLGTFHAIAARMLRKHAELV
GLQSNYTIIDTDDQIRLLKQLIVANDLDEKRWPARQLAGLIDRWKNRGLLPGELDAAENE
AYANGRGEQMYRLYQDRLKALNACDFGDLLLHMVTILKAHGDVQAEYRRRFKYIMVDEYQ
DTNTVQYLWLRLLAEVKGDAGHNICVVGDDDQSIYSWRGAEVANILRFERDFPGATIIKL
EQNYRSTPQILAAASTLIGANSERLGKTLWTEKPEGEKLRVIGVWDGPEEARRVGEDAET
LMRDGIKLANAAILVRAQFQTREFEDRFIQIGLNYRIVGGFRFYERAEIRDALAYLRVIA
QPSDDLAFERIYNTPKRGLGQKTLEKLHRHARQANMPLAAAALDICDTDELPPRARNTVV
DLMRSFARWREEAKTLAPAELARMVLDESGYTEALQAEKSAEAAGRLENLSELARAMEEY
ETLGAFLEHVSLVMDNDSADDADTITIMTMHAAKGLEFDHVFLPGWEEGVFPSQRSLDEG
GLKSLEEERRLAYVAITRARKRCTILHAANRRIYGQWTSAIPSRFVEELPEDMIEMETTM
TGGASLWRASFSERDDPFAHVAATQPSRTMTRGPGFRRASQGQYDPAPKRIVEAGRSAAS
FAAKPRTDIAIGQRVFHDKFGYGQVMGQEGNKLEIEFEQAGNKRLLDSFVRPAD
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacagcgcacttactccgccccgctccgccctcacccatgcccgggagccttgg
ctggagtctctcaacgccccccagcgcgaggcggtgctgacgaccgagggaccggtgctg
atgctcgcgggcgcgggcaccggcaagacggcggcgctgaccgcccgtctggcgcatctg
gtcgccagccggcgcgcatggccgagcgagatcctgtgcgtcaccttcaccaacaaggcc
gcgcgcgagatgcgcgagagggtcggcgggctgatcggccccgcggtcgaaggcatgccg
tggcttggcacgttccacgccatcgcagcccggatgctgcgcaagcatgccgaactagtc
ggcctgcagtccaattacacgatcatcgataccgacgaccagatccgcctgctgaagcag
ctgatcgtggccaacgacctggatgaaaagcgctggccagcccggcagctggccgggctg
atcgatcgctggaagaaccgcggcctgcttcccggcgagctggatgcagccgagaacgag
gcctatgccaatggccggggcgagcagatgtaccggctctaccaggaccggctgaaggcg
ctgaacgcctgcgacttcggcgatctgctgctgcacatggtgacgatcctcaaggcgcat
ggcgacgtgcaggccgaatatcgccgccgcttcaaatatatcatggtggacgaataccaa
gacaccaacaccgtccagtacctctggctgcggctgctggccgaggtgaagggcgatgca
ggccacaatatctgcgtggtgggcgacgacgaccagtcgatctattcctggcgcggggcg
gaggtcgccaatatccttcgcttcgaacgcgattttcccggcgcgacgatcatcaagctg
gaacagaactatcgctccacgccgcagatcctggccgccgcatcgaccctgatcggcgca
aacagcgagcggcttggcaagacgctgtggaccgagaagcccgagggcgagaagctgcgc
gtgatcggcgtctgggacggtccggaagaagcgcgccgcgtgggcgaagatgccgagacg
ctgatgcgcgacggcataaagctggccaatgccgcgatcctggttcgcgcgcagttccag
acccgcgagttcgaggaccggttcatccagatcgggctgaactatcgcatcgtgggcggc
ttccgcttctacgaacgtgcggagatccgcgatgcgctggcctatctgcgggtcatcgcg
cagccgtcggacgacctcgccttcgagcggatctacaatacgcccaagcgcgggctgggc
cagaagacgctggaaaagctgcaccgccatgcgcggcaggcgaacatgccgctggccgca
gccgcgctcgacatttgcgataccgacgaattgccgccgcgcgcgcgcaatacggtcgtc
gacctgatgcgcagtttcgcgcgctggcgcgaggaagcgaagacgctggcccccgccgaa
ctcgcgcgcatggtgctggacgaaagcggctacaccgaggcgctgcaggcggaaaagagc
gccgaggccgccgggcggctagaaaacctgtccgaacttgcgcgggcgatggaggaatac
gaaacgctgggcgcgtttttggagcatgtcagcctggtgatggacaacgattcggcggac
gacgccgacaccatcacgatcatgacgatgcatgccgccaagggcctggagttcgaccat
gtcttcctccccggctgggaagaaggcgtgttcccgtcgcagcgttcgctagacgagggc
ggattgaagtcgctggaggaagagcgcaggcttgcctatgtggcgatcacgcgggcccgc
aagcggtgcaccatcctgcatgccgccaatcgccgcatctatggccagtggaccagcgcg
atcccgtcccgcttcgtcgaggagctgcccgaggacatgatcgagatggaaacgaccatg
accggcggcgcatcgctatggcgcgccagcttcagcgagcgggacgacccgttcgcgcat
gtcgcggccacgcagccgtcacgcaccatgacacgcgggcctggcttccgccgggcttcg
caggggcaatacgatcccgcgcccaagcgcattgtcgaggcggggcgcagcgccgccagc
tttgccgccaaaccgcggaccgacatcgccattggacagcgcgtcttccacgacaagttc
ggctatggccaggtgatggggcaggaaggcaacaagctcgagatcgagttcgagcaagcc
ggcaacaagcgcctgctagacagcttcgtaaggcccgccgactag
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