Croceicoccus marinus: A9D14_05670
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Entry
A9D14_05670 CDS
T04890
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cman
Croceicoccus marinus
Brite
KEGG Orthology (KO) [BR:
cman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cman03032
]
A9D14_05670
03400 DNA repair and recombination proteins [BR:
cman03400
]
A9D14_05670
Enzymes [BR:
cman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A9D14_05670
DNA replication proteins [BR:
cman03032
]
Prokaryotic type
DNA Topoisomerases
A9D14_05670
DNA repair and recombination proteins [BR:
cman03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A9D14_05670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ARU15761
UniProt:
A0A1Z1FAD6
LinkDB
All DBs
Position
complement(1180008..1181036)
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AA seq
342 aa
AA seq
DB search
MASSAQPGELSKLIYVDDSLPGITRRKSGKGWAYFDPKGSRIKDRVEIDRLNSVALPPAY
ADAWYCPAANGHILATGIDARGRKQYRYHPDFRSHQDGEKFDRCLAFGKALPLVRKQVAE
DLAESTVTRERAIASVVRLLDLGRLRVGNESYAKRNKSFGATTLRSRHAEVKAGRLRLRF
KGKSGQNREVVLTDRVLAKTVREMHELPGQHLFRYVGDDGEPHSVSSCDVNDYLRKSMGE
DFTAKDFRTFHGSVLAFTELANANGRVPIRQLLEVVAGKLGNTPAVTRKSYIHPAVIALV
DQQLRWRAALKFPRKTRWQSREERALIALLEKSPSAADLLAA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcaagctctgcacaacccggtgaactctccaagctcatctatgtcgatgactccctt
cccggcatcacccggcgcaagagtggcaagggttgggcctatttcgatccaaagggcagc
cggatcaaggaccgcgttgagatcgaccggctgaattcggtcgccttgccgccggcctat
gccgatgcctggtactgccccgccgcgaatggacatattctggccaccggcatcgatgcg
cgcgggcgcaagcaataccgctatcatcccgatttccgcagccaccaggatggcgagaag
ttcgaccgctgtctggcgttcggcaaggccctgccgctggtgcgcaagcaggtggcggag
gacttggcggaaagcaccgtgacgcgcgagcgggcgatcgccagtgtcgtgcggctgctg
gacctgggtcgcctgcgcgtcgggaacgagagctatgcgaagcggaacaagagctttggc
gcgaccaccttgcgcagccgccatgccgaggtgaaggccggacggcttcgcctgcgcttc
aagggcaagtcgggccagaaccgcgaggtcgtactgaccgaccgcgttctggcaaagacc
gtgcgcgaaatgcacgaactgcccggacagcacctgtttcgctatgtcggcgatgacgga
gagccgcattcggtgtcgtcgtgtgacgtcaacgactatctgcgcaaatccatgggtgag
gattttaccgccaaggatttccgcactttccacggcagcgttctggccttcaccgaactg
gccaatgccaatggccgcgtgcccatccggcagctgctcgaggtggtggcgggcaagctg
ggcaatacgcccgcggtgacgcgcaagtcctatatccacccggcggtgatcgcgctggtg
gaccagcaattgcgctggcgggccgcgctgaaatttccgcgcaagacccgctggcagagc
cgcgaggagcgcgcgctgatcgccctcctcgaaaagagccccagcgcggcggacctgctg
gcggcctga
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