Croceicoccus marinus: A9D14_11840
Help
Entry
A9D14_11840 CDS
T04890
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cman
Croceicoccus marinus
Pathway
cman03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cman00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9D14_11840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cman03019
]
A9D14_11840
03110 Chaperones and folding catalysts [BR:
cman03110
]
A9D14_11840
03029 Mitochondrial biogenesis [BR:
cman03029
]
A9D14_11840
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cman04147
]
A9D14_11840
Enzymes [BR:
cman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
A9D14_11840
Messenger RNA biogenesis [BR:
cman03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A9D14_11840
Chaperones and folding catalysts [BR:
cman03110
]
Heat shock proteins
HSP60 / Chaperonin
A9D14_11840
Mitochondrial biogenesis [BR:
cman03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
A9D14_11840
Exosome [BR:
cman04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A9D14_11840
Exosomal proteins of other body fluids (saliva and urine)
A9D14_11840
Exosomal proteins of breast cancer cells
A9D14_11840
Exosomal proteins of colorectal cancer cells
A9D14_11840
Exosomal proteins of bladder cancer cells
A9D14_11840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ARU16743
UniProt:
A0A1Z1FDF5
LinkDB
All DBs
Position
2482314..2483963
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDVKFSRDARERILKGVDTLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELKDKFENMGAQMLREVASKANDAAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGI
DLAVTKVVENLKARSKDVSGTSEISQVGVISANGDKEVGEKIAEAMEKVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFVTNPEKMTVELDDPYILIHEKKLSNLQSMLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDISILTNGEM
ISEDLGIKLENVTLNMLGQAKKVSIDKDNTTIVDGAGDADGIKARVEQIRAQIETTTSDY
DREKLQERLAKLAGGVAVIKVGGASEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALEGLKGDNDDQTRGVDIIRQAILAPVRQIATNAGFDGAVVSGNLLREGDETQGFN
AATDVYENLVAAGVIDPTKVVRTALQDAASVAGLLITTEAAISEFPEDKSSPAMPDMGGM
GGMGGMGGF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggacgtgaagttttcgcgtgacgcacgcgaacgcatcctgaagggtgtc
gacaccctcgccaatgccgtcaaggtcacgctgggccccaagggccgcaacgtcgtgatc
gacaagagcttcggcgcaccccgcatcaccaaggacggcgtcaccgtcgccaaggaaatc
gaactcaaggacaagttcgagaacatgggcgcccagatgctgcgcgaagtcgcatcgaag
gcgaacgacgccgccggtgacggcaccaccaccgccaccgtgctggcccaggccatcgtg
cgcgaaggcatgaagtcggtcgcggccggcatgaacccgatggacctgaagcgcggcatc
gatcttgccgtcaccaaggtggtcgagaacctgaaggcgcgttcgaaggacgtttcgggc
acctcggaaatctcgcaggtcggcgtgatttcggccaatggcgacaaggaagtcggcgag
aagatcgccgaagccatggaaaaggtcggcaaggaaggcgtgatcaccgtcgaagaggcg
aagggtctcgaattcgagctcgacgtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccctatttcgtgaccaatccggaaaagatgaccgtcgaactcgacgatccctatatc
ctgatccacgagaagaagctctcgaacctgcagtcgatgctgccgatcctcgaggccgtg
gtgcagtcgggtcgtcccctgctgatcatcgcggaagacatcgagggtgaggcgctcgcc
acgctcgtcgtcaacaagctgcgcggcggcctgaagatcgcggccgtcaaggctcccggc
ttcggcgatcgccgcaaggcgatgctgcaggacatctcgatcctcaccaatggcgagatg
atcagcgaagacctgggcatcaagctcgagaacgtgaccctgaacatgctgggccaggcc
aagaaggtcagcatcgacaaggacaacaccacgatcgtcgacggcgccggcgatgccgac
ggcatcaaggcccgcgtcgagcagatccgcgcgcagatcgagaccaccacctcggactac
gaccgtgaaaagctgcaggaacgcctggcgaagcttgccggcggcgtggccgtgatcaag
gttggcggcgcttcggaagtcgaggtgaaggaacgcaaggaccgcgtcgacgacgcgctg
cacgcaacccgcgcagccgtcgaagaaggcatcgtccccggcggcggcacggcgctgctg
tacgccaccaaggccctcgaagggctcaagggcgacaacgacgaccagacccgcggcgtg
gacattatccgccaggccattctggccccggttcgccagatcgcgaccaacgccggcttc
gacggtgcggtcgtctcgggcaatttgctgcgcgaaggtgacgaaacgcagggcttcaac
gctgcgaccgacgtttacgagaacctcgtggccgccggcgtgatcgacccgaccaaggtc
gttcgcacggcgctgcaggacgcggcttcggtcgccggcctgctgatcaccaccgaagcg
gcgatcagcgagttcccggaagacaagtcctcccccgcgatgcccgacatgggcggaatg
ggcggcatgggcggcatgggcggcttctaa
DBGET
integrated database retrieval system