Croceicoccus marinus: A9D14_17905
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Entry
A9D14_17905 CDS
T04890
Name
(GenBank) RNA polymerase
KO
K24073
RNA polymerase sigma factor CnrH
Organism
cman
Croceicoccus marinus
Brite
KEGG Orthology (KO) [BR:
cman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cman03021
]
A9D14_17905
Transcription machinery [BR:
cman03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A9D14_17905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
PhyR_sigma-like
Sigma70_r4
HTH_Tnp_ISL3
HTH_28
Sigma70_ECF
HTH_23
GerE
KORA
DUF134
YdaS_toxin
HTH_29
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ARU18236
UniProt:
A0A217EYN5
LinkDB
All DBs
Position
pCME4A9II:complement(47112..47672)
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AA seq
186 aa
AA seq
DB search
MQGQPDSQEQALVAKVAAGDRRAFTELVEPLIPRLLATSLRMLGAHDEAEDVVQNALASA
WIARARLGPARPVLPFLTTITLNKCRDKLRRRKAAQFLGFGNASMPELASDPAPSPETET
VDRQLLQKTHAEIQRLPLRLREALILAAIEGRSQSEVADILGISEKAVESLVYRARKVLK
EKVSRE
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggggcagccggatagtcaggagcaggcgcttgtcgcaaaagtcgccgctggtgac
cgccgcgcattcacggaacttgtagagccgctcatacctcgattgctcgcaacctcattg
cgaatgcttggcgcgcacgatgaagccgaagacgtcgtgcagaatgccctagcttcggct
tggatcgcacgcgcgcggctaggtccggcgcgccccgttctcccgttcctcacgaccatc
acactaaacaaatgtcgcgacaaactccgcaggcggaaggcagcgcagttcctggggttc
ggaaatgcttccatgccggaacttgcatccgatcctgcgccctctccggaaaccgagaca
gtcgatcgccagcttctgcaaaagacccatgccgaaattcaacgactgcctttgcggctg
cgcgaggcgctgattctcgcggccatcgagggccgaagccagagcgaggttgccgacata
ctgggcatttctgaaaaggcggtggaatcgctggtctaccgcgcccgaaaggttctgaag
gaaaaagtgtcgcgcgagtga
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