Colossoma macropomum (tambaqui): 118796941
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Entry
118796941 CDS
T09004
Symbol
viml
Name
(RefSeq) vimentin like
KO
K07606
vimentin
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118796941 (viml)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118796941 (viml)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cmao04812
]
118796941 (viml)
04147 Exosome [BR:
cmao04147
]
118796941 (viml)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
118796941 (viml)
Cytoskeleton proteins [BR:
cmao04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
118796941 (viml)
Exosome [BR:
cmao04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118796941 (viml)
Exosomal proteins of other cancer cells
118796941 (viml)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
Trimer_CC
GAS
DUF7491
TolA_bind_tri
DUF1664
FlgN
Laminin_II
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
118796941
NCBI-ProteinID:
XP_036411992
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MSRLSSTVSSYRKRFGDERSRVFSSSLRSRTSSAPVLHAISSARARASAASAMSLSACAP
APDFSLSDAVNAEFRTNRTNERAQLQSLNERFASYIEKVRTAEQRNRALTAELEQLRRGH
GASRAAEIYEEELRALRRQVDELTGEKARAEVARDNLIQDIERLREKLQEEILQREEAEN
SMQSFRQDVDNAALARVDLERKVDSLQDEIAFLKKLHEEEMVELQAQIQQQQVQVDLDVA
KPDLTAALRDVRLQYENLATKNIQESEEWYKSKFADLTEAANRNNEALRAAKQEANEYRR
QVQALTCDVDALKGTNESLERQMRETEENFAMESSGYQDTISRLEEDIHNMKDEMARHLR
EYQDLLNVKMALDIEIATYRKLLEGEESRISTPLPNFSTLNLRETMLESRPMVESTTTKK
VLIKTIETRDGQVINESTQNHEDLE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggctctcctccaccgtctcctcctaccggaagcgcttcggtgatgagcgcagc
cgcgtgttttcctcctcgctgcgctcgcgcacgtcctccgcaccggtgctgcatgcgatc
tccagcgcgagggcgcgcgcgtctgccgcgtccgccatgtctctgtccgcgtgcgcgccg
gcgccggacttctctctgagcgacgccgtaaacgcggagttccgcacgaaccgcacgaac
gagcgcgcgcagctgcagtcactgaacgagcgcttcgcgagctacatcgagaaggtgcgc
acggccgagcagcggaaccgcgcgctgaccgcagagctcgagcagctgcgccgcggacat
ggggcctcgcgcgccgcagagatctacgaggaggagctgcgcgcgctgcgcaggcaggtg
gacgagctgaccggagagaaggcgcgcgccgaggtggccagagacaatctgatacaggac
atcgagaggctccgagagaagctgcaggaggagattctccaaagagaagaggctgagaac
agcatgcagagcttcagacaggatgtggataatgcagcacttgcccgggtggacctggag
cggaaagtggactctctgcaggatgagattgccttcttgaagaagcttcatgaggaggaa
atggtagaactgcaagctcagatccagcagcagcaggtgcaggtggatctggacgtggct
aagcctgacctgaccgctgctctcagggacgtccggctgcagtatgagaacctggccact
aagaacatccaggagtccgaggagtggtacaagtctaagtttgctgatttgaccgaagct
gccaacaggaataatgaagctctacgagcagccaaacaggaggccaatgagtaccgccgg
caggtgcaggctctaacctgtgacgtggacgccctcaaggggacaaatgagtctctggag
cgtcagatgagagagacggaggagaactttgccatggagtcctcaggttaccaggacacc
atcagccgtctggaggaagacatccacaacatgaaggatgagatggcccgccacctgcgg
gagtaccaggacctgctcaacgtcaaaatggccctagacattgagattgccacctacaga
aagctgctggaaggggaggagagcagaatctcaacacctttgccaaacttttccaccctt
aatttgagagaaaccatgctggagtccagacctatggttgaaagcacaacaaccaagaag
gtgctcatcaagaccattgagaccagagatggccaggtgattaatgagtctacccagaac
catgaagatctggagtga
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