KEGG   Colossoma macropomum (tambaqui): 118796941
Entry
118796941         CDS       T09004                                 
Symbol
viml
Name
(RefSeq) vimentin like
  KO
K07606  vimentin
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118796941 (viml)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmao03019]
    118796941 (viml)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cmao04812]
    118796941 (viml)
   04147 Exosome [BR:cmao04147]
    118796941 (viml)
Messenger RNA biogenesis [BR:cmao03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     118796941 (viml)
Cytoskeleton proteins [BR:cmao04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     118796941 (viml)
Exosome [BR:cmao04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118796941 (viml)
  Exosomal proteins of other cancer cells
   118796941 (viml)
SSDB
Motif
Pfam: Filament Filament_head Trimer_CC GAS DUF7491 TolA_bind_tri DUF1664 FlgN Laminin_II TPR_MLP1_2
Other DBs
NCBI-GeneID: 118796941
NCBI-ProteinID: XP_036411992
LinkDB
Position
Unknown
AA seq 445 aa
MSRLSSTVSSYRKRFGDERSRVFSSSLRSRTSSAPVLHAISSARARASAASAMSLSACAP
APDFSLSDAVNAEFRTNRTNERAQLQSLNERFASYIEKVRTAEQRNRALTAELEQLRRGH
GASRAAEIYEEELRALRRQVDELTGEKARAEVARDNLIQDIERLREKLQEEILQREEAEN
SMQSFRQDVDNAALARVDLERKVDSLQDEIAFLKKLHEEEMVELQAQIQQQQVQVDLDVA
KPDLTAALRDVRLQYENLATKNIQESEEWYKSKFADLTEAANRNNEALRAAKQEANEYRR
QVQALTCDVDALKGTNESLERQMRETEENFAMESSGYQDTISRLEEDIHNMKDEMARHLR
EYQDLLNVKMALDIEIATYRKLLEGEESRISTPLPNFSTLNLRETMLESRPMVESTTTKK
VLIKTIETRDGQVINESTQNHEDLE
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgtcccggctctcctccaccgtctcctcctaccggaagcgcttcggtgatgagcgcagc
cgcgtgttttcctcctcgctgcgctcgcgcacgtcctccgcaccggtgctgcatgcgatc
tccagcgcgagggcgcgcgcgtctgccgcgtccgccatgtctctgtccgcgtgcgcgccg
gcgccggacttctctctgagcgacgccgtaaacgcggagttccgcacgaaccgcacgaac
gagcgcgcgcagctgcagtcactgaacgagcgcttcgcgagctacatcgagaaggtgcgc
acggccgagcagcggaaccgcgcgctgaccgcagagctcgagcagctgcgccgcggacat
ggggcctcgcgcgccgcagagatctacgaggaggagctgcgcgcgctgcgcaggcaggtg
gacgagctgaccggagagaaggcgcgcgccgaggtggccagagacaatctgatacaggac
atcgagaggctccgagagaagctgcaggaggagattctccaaagagaagaggctgagaac
agcatgcagagcttcagacaggatgtggataatgcagcacttgcccgggtggacctggag
cggaaagtggactctctgcaggatgagattgccttcttgaagaagcttcatgaggaggaa
atggtagaactgcaagctcagatccagcagcagcaggtgcaggtggatctggacgtggct
aagcctgacctgaccgctgctctcagggacgtccggctgcagtatgagaacctggccact
aagaacatccaggagtccgaggagtggtacaagtctaagtttgctgatttgaccgaagct
gccaacaggaataatgaagctctacgagcagccaaacaggaggccaatgagtaccgccgg
caggtgcaggctctaacctgtgacgtggacgccctcaaggggacaaatgagtctctggag
cgtcagatgagagagacggaggagaactttgccatggagtcctcaggttaccaggacacc
atcagccgtctggaggaagacatccacaacatgaaggatgagatggcccgccacctgcgg
gagtaccaggacctgctcaacgtcaaaatggccctagacattgagattgccacctacaga
aagctgctggaaggggaggagagcagaatctcaacacctttgccaaacttttccaccctt
aatttgagagaaaccatgctggagtccagacctatggttgaaagcacaacaaccaagaag
gtgctcatcaagaccattgagaccagagatggccaggtgattaatgagtctacccagaac
catgaagatctggagtga

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