Colossoma macropomum (tambaqui): 118797073
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Entry
118797073 CDS
T09004
Symbol
shhb
Name
(RefSeq) LOW QUALITY PROTEIN: tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118797073 (shhb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmao01002
]
118797073 (shhb)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cmao00536
]
118797073 (shhb)
Peptidases and inhibitors [BR:
cmao01002
]
Cysteine peptidases
Family C46: hedgehog family
118797073 (shhb)
Glycosaminoglycan binding proteins [BR:
cmao00536
]
Heparan sulfate / Heparin
Morphogens
118797073 (shhb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
118797073
NCBI-ProteinID:
XP_036412186
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MLLLRRIALASLLCLFLTSCGLACGPGRGYGKRRHPKKLTPLAYKQFIPNVAEKTLGASG
KYEGKITRDSERFKELTPNYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGNHLEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAVKSGGCFPGSSTVQLEDGGTKLVRDLREGDRVLAADEQGRAAFSDFIM
FMDREPRARRQFIVIETVAPARRLTLTAAHLVLVRNGNSTGSSPLMSARFASSVRPGHEV
FVSEEKEQGDGRLRSARVTRVHTVELEGAYAPVTAHGTVVVDRVLASCYAAVEQHRWAHW
ALAPARLSHALAAWMRPYWQRAAKNNTVTTPETEEEEEEEEGMHWYARALLRVGTWLLHR
DSFHPLGLADTETSAS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgaggaggatcgcactcgcatctctgctctgcctctttctcacgtcctgt
ggattggcctgtggtccaggcaggggttatgggaagcgcaggcaccccaagaagctcacg
ccgctggcttacaagcagtttattcccaacgtggctgagaagactctcggcgcgagcggc
aaatacgagggcaaaatcacgagggactccgagaggtttaaggagctcacgcccaactac
aaccctgatatcatcttcaaggatgaggagaacacgaacgcggacaggctgatgacacag
cgctgcaaggataagctgaattcgctggcgatctcggtgatgaatcagtggccgggggtg
aagctgcgtgtgacggagggctgggatgaagatggaaatcacctggaggagtcactgcat
tacgagggccgcgcggtggacatcaccacgtctgaccgcgacaagagcaaatacggcatg
ctgtccagactggccgtggaggcggggttcgactgggtttactacgagtccaaagcacat
atacactgctccgttaaagcagaaaactcggtggccgttaagtccggcggctgtttcccg
ggctcctcgacggtgcagctggaggacggcgggacgaagctcgtgcgtgatctgcgcgag
ggtgaccgcgtgctggcggcggacgagcagggacgcgcggcgttcagcgacttcatcatg
ttcatggacagagagccgcgcgcgcggagacagttcatcgtcatcgagacggtggcgccc
gcgaggcggctcacgctcacggccgcgcacctcgtgctcgtgcgcaacggaaactctacc
ggctcctctccgctgatgtccgcgaggttcgcgagcagcgtgcgtcccgggcacgaggtg
ttcgtgtccgaggagaaagagcaaggggacgggcgtctgcggagcgcgcgcgtgacccgc
gtgcacaccgtggagctggagggcgcgtacgcgccggtgactgcgcacggcacggtggtg
gtggaccgcgtgctggcctcgtgctacgcggccgtggagcagcaccgctgggcgcactgg
gcgctcgcgcccgccagactgagccacgcgctggcggcgtggatgcggccgtactggcag
cgcgcggcaaaaaacaacaccgtgacaacaccggagacagaggaggaggaggaggaggag
gaggggatgcactggtacgcgcgcgcgctgctgcgggtgggcacgtggctcctgcaccga
gactcatttcacccacttgggctcgcagacacagagaccagcgcgagctga
DBGET
integrated database retrieval system
