Colossoma macropomum (tambaqui): 118797081
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Entry
118797081 CDS
T09004
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03030
DNA replication
cmao03410
Base excision repair
cmao03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118797081 (zgc:110269)
03410 Base excision repair
118797081 (zgc:110269)
03450 Non-homologous end-joining
118797081 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmao03032
]
118797081 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118797081 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmao04147
]
118797081 (zgc:110269)
DNA replication proteins [BR:
cmao03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
118797081 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
118797081 (zgc:110269)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
118797081 (zgc:110269)
Exosome [BR:
cmao04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118797081 (zgc:110269)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
XPG_I_2
SfmD_perox
DNA_pol_lambd_f
Motif
Other DBs
NCBI-GeneID:
118797081
NCBI-ProteinID:
XP_036412195
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MGITKLADLIRGDAPGSVSYKEIGDYSGKVIALDTSIVLNQFRSAVPRLQLSPHLGLFYR
TLTFLEHDIKPVFVFDGKPPSQKSAVLEKRAQTAGWSSSHRSNTVSTKTQEFLRLLELMG
VPYVMAPGDGEALCAHLVRSGVVDAVASEDMDTLAFGGTVLLRQLNAKRDSEVTEYSLPK
LLEALQLTQEEFVDLCILLGCDYCDKITGLGPSRALKLIQQHRTIEHVMQNINRKTHPVP
LGWQFKAARRLFLEVPQTDPPKLSWSDPDEEGLVKFLCVEKHVKEERVRGRMEKFRQTLS
KRRKQREDEEKEGRTRQSRLDEFFRVTRKRRSADAVVSTSTKRAKAK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcactaaactggcagatttaatccgcggcgacgccccgggctcggtgtcctac
aaagagatcggagattacagcggaaaagtgatcgcactcgatacctcaattgttctgaac
cagtttcgttcagctgtgcccaggctgcagctcagccctcacctcggcctgttctaccgc
accctcacgttcctggagcacgacatcaagccggtctttgtgttcgatgggaagcctccc
agtcagaagagcgcagtgctggagaaaagagcacagactgcaggctggagcagctcacat
cgctccaacacagtgtccaccaaaactcaggaattcctccgtctcttggagctcatgggt
gtgccctatgtcatggctccgggagacggggaggcgctgtgtgcacacctggttagaagc
ggtgtagtcgatgctgtggcctcagaggacatggacacactggcgtttggaggaaccgtc
ctgcttcgccaactcaatgcaaagagagacagtgaggtcactgagtactccttgccaaag
ctactggaagctctacagctgacacaggaagagtttgttgacctgtgtatattactgggc
tgtgattactgtgataaaataacgggtctgggcccgagccgagcgctgaagctgatccag
cagcaccgcaccatagagcacgtgatgcagaacatcaacagaaagacgcaccctgttcct
ttaggctggcagttcaaggctgcccgcaggctgtttttggaggtgccccagactgacccc
ccaaagctgagctggagcgacccggacgaggagggactggtgaagttcttgtgtgtggag
aaacatgtgaaggaggagagggttcgagggcggatggagaagtttcggcagactctcagt
aagcggaggaaacagagggaggatgaggagaaagagggaagaaccagacagtcacgactg
gatgaattctttcgagtcacaaggaaaagacggtctgcagatgctgtcgtttccacctcc
acaaagcgagcgaaggctaaataa
DBGET
integrated database retrieval system
