Colossoma macropomum (tambaqui): 118797808
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Entry
118797808 CDS
T09004
Name
(RefSeq) LOW QUALITY PROTEIN: protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118797808
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118797808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
118797808
NCBI-ProteinID:
XP_036412974
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MMFRDQVGILTDWFKGWNECEQTVALLSLLKRVSRTQARFLHICLEHWLADCTEIHLLEA
EANNAAIVSQWQQEPKEKAVSLLLSHLPLLQPRNSEAKCEYMNLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRTNLALWLNHLEEHLSARPPPPPGPYHHARQGSDEWPGPTE
SLEAHGWHDKPPSTCSSPAGQNGHMAFPGTGGVPSPINISNSTGLPSQVQPSPLKRSMSL
IPATQPGCGSDWLSQDEVGGRQGVGGAEHAPLSPQGSVASSGSEQTEEQTNTRNTFQEDG
SGMKDVPTWLKSLRLHKYASLFSQMSYEEMMVLTEQHLESQNVTKGARHKIALSIQKLRE
RQSVLKSLEKDILEGGNVRNALQELQQIIITPIKAYTPPTAAQREAEPGATPTDKAANPV
EEKDSSVEGFQTHNPPPCDGESSTTPISEGDIPGQFTRVMGKVCTQLLVSRPDEENISCY
LQLIEKCLTHEAFTETQKKRLASWKQQMLKLLRLFPRKAMLDMPMYRQKGWAYGSNSLPT
AGSVSGGLGRRGQRQFTIPPRGALPPTRIGLMTPGGITGASPRHTLTNPAALTGQGRQNL
WFGNPGGSNSMPSQSRSSVQRTHSLPVHTSPQTMLLFQQPECQVPGTDLEINPTLESLCL
SMTEHALEDGMDRTSTI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggaccaggtggggattctgacggactggtttaagggctggaacgagtgc
gaacagacggtggcgctgttgtcgctgctgaagagggtgtcgcggacgcaggcgcgcttc
ctgcacatctgtctggagcactggctggcggactgcaccgagatacacttactggaggcc
gaagccaacaatgcagccatcgtcagtcagtggcagcaggagccaaaggagaaggccgtc
tctctgctgctgtctcacctgccgctgctgcagccgcggaacagcgaggcgaagtgcgag
tacatgaacctgctgcagaaggtgctgagccacaccatcgagagcagcctgttcgtggag
gaaagccgccagctgctctcgtacgccctcatccacccggccaccacgctggacgaccgc
accaacctcgccctctggctcaaccacctggaggagcacctgtcggcccgcccgccgccg
cctcccggaccgtaccaccacgcccggcagggctcggacgagtggcccggtcctacggag
tctctggaggcgcacggctggcacgataagcccccatcgacctgcagctcgcctgccggt
cagaacgggcacatggccttcccgggcacgggcggggtgccctcgccaatcaatatcagc
aacagcacgggcctccccagtcaggtgcagccgagccctctgaagcgctccatgtccctc
attcccgccactcagccgggctgcggctccgattggctgagccaggatgaggtgggcgga
cggcaaggcgtgggcggagccgaacacgcccctctgtcgccgcagggcagcgtggcgtca
tcaggcagcgaacagacggaggagcagaccaacacacgaaacaccttccaggaggacggc
agcggcatgaaagacgtgccgacgtggctgaagagcctccgcctacacaagtacgcctca
cttttctcccagatgagctacgaggagatgatggtcctgactgagcagcatctcgagtca
cagaacgtgaccaaaggcgcccgacacaagatcgcgctgagcattcagaagctgcgggag
cggcagagcgtcctgaagtccctcgagaaggatattttagaaggcgggaacgttcggaat
gctttgcaggagctgcagcagatcatcattacgccaatcaaagcttacacaccacccact
gctgcccagagggaggcggagcctggagctacgcccaccgataaagcagccaatcccgtg
gaagagaaggactcatctgtggagggattccaaacgcataatcctcctccgtgtgacggg
gagtcgtcgactacaccgatttcagaaggagatattccgggacagttcactcgagtgatg
gggaaagtgtgtactcagctgctggtgtccaggccggacgaggagaacatcagctgctac
ctgcagctcatagagaagtgtctaacacatgaggcgttcacagagacgcagaagaagcgg
ctggcgtcatggaaacagcagatgctgaagttgctccgcctcttcccacggaaagccatg
ctggacatgcccatgtaccgccagaaaggatgggcgtacggctcgaactctctgcccaca
gcgggctctgtgagcggaggtctgggccgacggggacagaggcaattcaccatccccccg
cgcggcgcgctgccccccacccgcatcggcctcatgacccccgggggcatcaccggagct
tcgccgcggcacacgctcaccaaccccgccgcgctcacagggcagggccgacagaacctg
tggttcggtaaccctggaggcagtaacagcatgcccagccagagccgcagctccgtacag
agaacacattctctacctgtacacacgtccccgcagaccatgcttctgttccagcagcca
gaatgccaggttccagggacggatctggagatcaaccccacgctggagtcactgtgcctc
agtatgacggagcacgccttagaggatggaatggacagaacatcaacaatatga
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