Colossoma macropomum (tambaqui): 118797863
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Entry
118797863 CDS
T09004
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X1
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao00310
Lysine degradation
cmao01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118797863 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmao03036
]
118797863 (setdb2)
Enzymes [BR:
cmao01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
118797863 (setdb2)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118797863 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
118797863 (setdb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
PRDM2_PR
Motif
Other DBs
NCBI-GeneID:
118797863
NCBI-ProteinID:
XP_036413036
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MDESDVERAKDFWSQVDVDRAFDELLRFLVSLRDNIKNKTASDKGYIQARNIILEAGVTL
RAALKIVAIEEVLISEDILTVSVSDSHCTLLKMKDGPVPEDVLHEDSSGSSRNPESVSDN
SQMSLSNRNDAMLSGKFDQYDHVVLLSPSRLSPEDQLAPMSPIQISYQQHDCSAACLPRL
PPSVNHFLGHNPLRVPLLCHFQRHCAKLRSFAEQEAEPQGEEPDSVEADVLYKAPCGRGL
CCMDDVLQFLQQTKSLGILLPVNFSFNPQVLPDRQAQPQLLGSTPSLPATILFERDISRG
TEALPVPLCNEVDGVRPKEFRYRKDRWPHGCFLSAAPFFTACCDCTDGCTDSQSCTCLQL
SLKAGADPGQLYVHQRLNEPVSTGLYECGPWCGCEKSRCLNRVVQRGLRVRLQVFRTHDK
GWGVRCRDDLDRGTFVCTYAGVVLSLGRSLEEPLSSKNMKEEPVSDDEVEVVEEWTLPTG
QKKTVTESLDTSPPLYIPVIQRPAGQLPVALDGEKQQLEQQEQQEEMNASSLCDSSKTET
KSQDDKEEVVRKKPRLDGKDENGDTTLPDQTVPKGDVSKQGCQEQMYYLDASKEGNVARF
INHSCNPNLFVQNVFVDTHDPKFPTIAFFTCRTITAGTELTWNYSYNPGSDPEHEVPCLC
GYENCQAVLI
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcagatgttgagagagcaaaggacttctggtctcaagtggatgtggaccgg
gcttttgatgagttactgaggttccttgtgagtctgagagacaacatcaaaaataagact
gcttcagacaaaggctacatccaagccaggaatattatcttggaggctggcgtgacactg
agggcggccttaaagattgttgccattgaggaggtgctcatcagtgaagacattctgacc
gtgtctgtgtcagattctcactgtactctactgaaaatgaaggatggacctgtgccagag
gatgttttacacgaggacagctcaggaagttcgaggaatccggagtctgtttcagacaac
agccagatgtctttgtctaacagaaacgatgccatgttatcaggaaagtttgaccaatat
gatcatgtggtgctgctgtcaccttccagactgtcaccggaggaccagttggcccccatg
tcacccattcaaatttcctaccagcaacacgactgcagtgcagcctgcctccctcgccta
ccacctagcgtaaaccattttctgggtcataatcctttgagagtgcctcttctctgccac
ttccagcggcattgtgccaagctccgctcatttgcagagcaagaggcggagccacaaggg
gaggagccggactcagtggaggcagatgtgctctataaagccccttgtgggcggggcttg
tgctgcatggatgacgtgctgcagttcctacaacagaccaaaagccttggaattctgctg
cctgtgaattttagcttcaatccgcaggtgctgccggaccgccaggctcagccacaactg
ctcggatccactccatctcttccggcaaccatcttgtttgagagagacattagccgtggg
acagaggcgctcccagttccgctgtgtaacgaggtggatggggtcagacccaaggaattt
cgttaccgcaaagaccgctggcctcatggctgcttcttaagtgcagctccgttcttcaca
gcctgttgcgactgcacagacggctgcacagacagtcagagctgcacttgtcttcagctg
tctctgaaggctggtgctgacccaggccagctttacgtccaccagcggctaaatgaacct
gtgtccacagggctgtatgagtgcggcccttggtgtggatgtgagaaaagcaggtgtctg
aatcgtgtggtccagcgtggactccgtgttcgcctgcaggtgtttcgcacccatgacaaa
gggtggggtgtacgctgtcgtgacgacctggacaggggcacctttgtctgtacttacgca
ggtgttgtccttagtcttgggcggagcttagaagagcccctgtcctctaaaaacatgaag
gaggagccagtgtcggatgacgaggtggaggtagtggaggaatggactcttcctacaggg
cagaaaaaaacagtcactgaatcactggacacttctccccctctttatattcctgtgatc
cagaggcctgcaggccaactgccagtggcactggatggagaaaagcaacagctggaacag
caggaacagcaggaggaaatgaatgcctcttcattatgtgattccagtaagacagaaact
aaaagccaagatgataaagaggaagtagtgaggaagaagcccaggttggatggcaaggat
gaaaatggagacaccacccttccagatcagacagtgcccaaaggagatgtatcgaaacaa
ggctgtcaggagcaaatgtattaccttgatgcttcaaaagaaggaaatgtagcaagattt
ataaatcacagctgcaatcccaacctatttgtccagaatgtctttgttgatactcacgac
cccaaattcccaacaattgccttctttacatgcagaacaatcacagcagggacagaactg
acctggaactactcctataacccgggaagcgaccctgagcatgaggtaccgtgcctgtgc
ggttacgagaactgtcaagcagttcttatctaa
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